RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 FAM237AA0A1B0GTK4 181 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 A0A1W2PQF6 199 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 PRRT4C9JH25 899 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 CACNG3O60359 315 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 KRT13P13646 458 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 KIF11P52732 1056 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 BYSLQ13895 437 aaKnown RBP20.27■□□□□ 0.84
COL27A1-205ENST00000485397 LYSMD4Q5XG99 296 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 SCD5Q86SK9 330 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 SYT12Q8IV01 421 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 XPO6Q96QU8 1125 aaKnown RBP20.27■□□□□ 0.84
COL27A1-205ENST00000485397 MARK1Q9P0L2 795 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 CALCOCO1Q9P1Z2 691 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 WDR35Q9P2L0 1181 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 PCDHA5Q9Y5H7 936 aa20.27■□□□□ 0.84
COL27A1-205ENST00000485397 KMT2BQ9UMN6 2715 aaPredicted RBP20.27■□□□□ 0.84
COL27A1-205ENST00000485397 ITPKAP23677 461 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 PSMC2P35998 433 aaKnown RBP20.26■□□□□ 0.83
COL27A1-205ENST00000485397 PLA2G4AP47712 749 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 GOLGA8FQ08AF8 430 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 GOLGA8DPQ0D2H9 430 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 ZNF252P-AS1Q0IIN9 211 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 ADAM9Q13443 819 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 ZNF394Q53GI3 561 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 C10orf120Q5SQS8 335 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 PPP1R26Q5T8A7 1209 aaPredicted RBP20.26■□□□□ 0.83
COL27A1-205ENST00000485397 BHMTQ93088 406 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 P2RY11Q96G91 374 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 DUSP16Q9BY84 665 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 PNPLA8Q9NP80 782 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 DNMT3LQ9UJW3 386 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 NAGPAQ9UK23 515 aa20.26■□□□□ 0.83
COL27A1-205ENST00000485397 CISD3P0C7P0 127 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 MAPK8P45983 427 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 SPDYCQ5MJ68 293 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 KIAA1211LQ6NV74 962 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 KLHDC10Q6PID8 442 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 Q6ZNB5 142 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 KRBA2Q6ZNG9 492 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 CHPFQ8IZ52 775 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 GUF1Q8N442 669 aaKnown RBP20.25■□□□□ 0.83
COL27A1-205ENST00000485397 SEMA4DQ92854 862 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 NUSAP1Q9BXS6 441 aaKnown RBP20.25■□□□□ 0.83
COL27A1-205ENST00000485397 GOLPH3LQ9H4A5 285 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 TMEM8AQ9HCN3 771 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 CD248Q9HCU0 757 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 FSCN3Q9NQT6 498 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 PLK2Q9NYY3 685 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 PILRBQ9UKJ0 227 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 RAD54BQ9Y620 910 aa20.25■□□□□ 0.83
COL27A1-205ENST00000485397 STC2O76061 302 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 ENGP17813 658 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 CSRP1P21291 193 aaKnown RBP20.24■□□□□ 0.83
COL27A1-205ENST00000485397 RPL13P26373 211 aaKnown RBP20.24■□□□□ 0.83
COL27A1-205ENST00000485397 DGKGP49619 791 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 RPL6Q02878 288 aaKnown RBP20.24■□□□□ 0.83
COL27A1-205ENST00000485397 ENPEPQ07075 957 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 LMAN2Q12907 356 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 FOXC1Q12948 553 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 SDE2Q6IQ49 451 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 CCDC186Q7Z3E2 898 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 CCDC150Q8NCX0 1101 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 IPO4Q8TEX9 1081 aaKnown RBP20.24■□□□□ 0.83
COL27A1-205ENST00000485397 EEF2KMTQ96G04 330 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 HEXIM2Q96MH2 286 aaKnown RBP20.24■□□□□ 0.83
COL27A1-205ENST00000485397 USP3Q9Y6I4 520 aa20.24■□□□□ 0.83
COL27A1-205ENST00000485397 TNRC6BQ9UPQ9 1833 aaKnown RBP20.23■□□□□ 0.83
COL27A1-205ENST00000485397 IGHV1OR15-9A0A0B4J2B8 117 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 AP5Z1O43299 807 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 KLKB1P03952 638 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 CEACAM1P13688 526 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 NDUFV2P19404 249 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 PSEN1P49768 467 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 ZCWPW2Q504Y3 356 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 KRT39Q6A163 491 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 SLC23A3Q6PIS1 610 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 SLC36A4Q6YBV0 504 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 SMYD4Q8IYR2 804 aaPredicted RBP20.23■□□□□ 0.83
COL27A1-205ENST00000485397 DEFB124Q8NES8 71 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 GABRG3Q99928 467 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 SLC6A17Q9H1V8 727 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 CACNA2D2Q9NY47 1150 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 RASAL2Q9UJF2 1139 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 CYP8B1Q9UNU6 501 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 PLXND1Q9Y4D7 1925 aa20.23■□□□□ 0.83
COL27A1-205ENST00000485397 A0A1W2PQ27 194 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 A0A1W2PQ64 194 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 A0A1W2PQD8 194 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 WASH3PC4AMC7 463 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 ZNF202O95125 648 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 TOP3BO95985 862 aaKnown RBP20.22■□□□□ 0.83
COL27A1-205ENST00000485397 CFIP05156 583 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 RALAP11233 206 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 SPINK2P20155 84 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 GTF2H1P32780 548 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 PEAR1Q5VY43 1037 aaPredicted RBP20.22■□□□□ 0.83
COL27A1-205ENST00000485397 CD93Q9NPY3 652 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 CLIC5Q9NZA1 410 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 FBXO10Q9UK96 956 aa20.22■□□□□ 0.83
COL27A1-205ENST00000485397 ASCC3Q8N3C0 2202 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms