RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 NRSN2Q9GZP1 204 aa9.48□□□□□ -0.89
COL8A1-207ENST00000483969 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
COL8A1-207ENST00000483969 THAP9Q9H5L6 903 aa9.48□□□□□ -0.89
COL8A1-207ENST00000483969 FAM124BQ9H5Z6 455 aaPredicted RBP9.48□□□□□ -0.89
COL8A1-207ENST00000483969 ABCB6Q9NP58 842 aa9.48□□□□□ -0.89
COL8A1-207ENST00000483969 LATS2Q9NRM7 1088 aa9.48□□□□□ -0.89
COL8A1-207ENST00000483969 DNMT3BQ9UBC3 853 aaKnown RBP9.48□□□□□ -0.89
COL8A1-207ENST00000483969 MRPS23Q9Y3D9 190 aaKnown RBP9.48□□□□□ -0.89
COL8A1-207ENST00000483969 YIPF1Q9Y548 306 aa9.48□□□□□ -0.89
COL8A1-207ENST00000483969 CLUHO75153 1309 aa9.48□□□□□ -0.89
COL8A1-207ENST00000483969 VNN2O95498 520 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 FGF19O95750 216 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 RHOP08100 348 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 ADH5P11766 374 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 MAGEA11P43364 429 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 MTIF2P46199 727 aaKnown RBP9.47□□□□□ -0.89
COL8A1-207ENST00000483969 YWHAEP62258 255 aaKnown RBP9.47□□□□□ -0.89
COL8A1-207ENST00000483969 NOP14P78316 857 aaKnown RBP9.47□□□□□ -0.89
COL8A1-207ENST00000483969 CYP27A1Q02318 531 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 STX1AQ16623 288 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 KLHL40Q2TBA0 621 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 CFAP221Q4G0U5 840 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 CBWD6Q4V339 395 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 CBWD3Q5JTY5 395 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 CBWD5Q5RIA9 395 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 SPOPLQ6IQ16 392 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 VSTM1Q6UX27 236 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 PDZD4Q76G19 769 aaPredicted RBP9.47□□□□□ -0.89
COL8A1-207ENST00000483969 DNAJB7Q7Z6W7 309 aaPredicted RBP9.47□□□□□ -0.89
COL8A1-207ENST00000483969 CRYBG2Q8N1P7 616 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 FBLIM1Q8WUP2 373 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 SEMA4DQ92854 862 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 CNOT6LQ96LI5 555 aaKnown RBP9.47□□□□□ -0.89
COL8A1-207ENST00000483969 CEP295NLQ96MC4 621 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 NECAB3Q96P71 396 aaPredicted RBP9.47□□□□□ -0.89
COL8A1-207ENST00000483969 CORO1BQ9BR76 489 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 GPR88Q9GZN0 384 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 NAT10Q9H0A0 1025 aaKnown RBP9.47□□□□□ -0.89
COL8A1-207ENST00000483969 SMYD3Q9H7B4 428 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 APOBEC3GQ9HC16 384 aaKnown RBP9.47□□□□□ -0.89
COL8A1-207ENST00000483969 TMLHEQ9NVH6 421 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 CDH22Q9UJ99 828 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 NLRC5Q86WI3 1866 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 PLXNA4Q9HCM2 1894 aa9.47□□□□□ -0.89
COL8A1-207ENST00000483969 PRRC2BQ5JSZ5 2229 aaKnown RBP9.46□□□□□ -0.89
COL8A1-207ENST00000483969 ATP2C2O75185 946 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 TPM2P07951 284 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 CSH1P0DML2 217 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 CSH2P0DML3 217 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 MYL4P12829 197 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 ALADP13716 330 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 DRD2P14416 443 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 TBXAS1P24557 533 aaPredicted RBP9.46□□□□□ -0.9
COL8A1-207ENST00000483969 CYP2F1P24903 491 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 ASPAP45381 313 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 RAP1GAPP47736 663 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 NDST1P52848 882 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 PSMC1P62191 440 aaKnown RBP9.46□□□□□ -0.9
COL8A1-207ENST00000483969 NTHL1P78549 312 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 MDH1BQ5I0G3 518 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 CDPF1Q6NVV7 123 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 CAVIN1Q6NZI2 390 aaKnown RBP9.46□□□□□ -0.9
COL8A1-207ENST00000483969 SCARA5Q6ZMJ2 495 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 ZAR1Q86SH2 424 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 SCN4BQ8IWT1 228 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 B3GALNT2Q8NCR0 500 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 GIPC2Q8TF65 315 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 PSMG2Q969U7 264 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 PCED1BQ96HM7 432 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 NT5C1BQ96P26 610 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 MED15Q96RN5 788 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 PKMYT1Q99640 499 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 NT5C1AQ9BXI3 368 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 BCO2Q9BYV7 579 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 ELOVL4Q9GZR5 314 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 SDCBP2Q9H190 292 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 CLEC4MQ9H2X3 399 aaPredicted RBP9.46□□□□□ -0.9
COL8A1-207ENST00000483969 ZFYVE1Q9HBF4 777 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 CRTAC1Q9NQ79 661 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 ASAH2Q9NR71 780 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 EHD2Q9NZN4 543 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 CEP72Q9P209 647 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 CDH7Q9ULB5 785 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 ATP8B3O60423 1300 aa9.46□□□□□ -0.9
COL8A1-207ENST00000483969 KIAA1671Q9BY89 1806 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 MYH11P35749 1972 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 C2CD4DB7Z1M9 353 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 HCRTO43612 131 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 LAMP2P13473 410 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 CD58P19256 250 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 BDNFP23560 247 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 EEF1GP26641 437 aaKnown RBP9.45□□□□□ -0.9
COL8A1-207ENST00000483969 ANXA13P27216 316 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 EPHA5P54756 1037 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 PCDH1Q08174 1060 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 INCA1Q0VD86 236 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 CUL2Q13617 745 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 MAN2A1Q16706 1144 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 DDR2Q16832 855 aa9.45□□□□□ -0.9
COL8A1-207ENST00000483969 GET4Q7L5D6 327 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms