RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 NAP1L3Q99457 506 aaPredicted RBP10.53□□□□□ -0.72
HDAC6-226ENST00000483656 C17orf80Q9BSJ5 609 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 TTLL2Q9BWV7 592 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 PCDH18Q9HCL0 1135 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 WDR6Q9NNW5 1121 aaKnown RBP10.53□□□□□ -0.72
HDAC6-226ENST00000483656 ANLNQ9NQW6 1124 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 TMPRSS4Q9NRS4 437 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 MRPL17Q9NRX2 175 aaKnown RBP10.53□□□□□ -0.72
HDAC6-226ENST00000483656 PIGVQ9NUD9 493 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 COMMD8Q9NX08 183 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 MTMR10Q9NXD2 777 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 GMIPQ9P107 970 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 FNIP2Q9P278 1114 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 PLXNA3P51805 1871 aa10.53□□□□□ -0.72
HDAC6-226ENST00000483656 BHMG1C9JSJ3 638 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 DYNC1I1O14576 645 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 CAPN9O14815 690 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 MDM4O15151 490 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 RAD51CO43502 376 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 PHF2O75151 1096 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 RTN3O95197 1032 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 CNPP09543 421 aaKnown RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 ZDHHC11BP0C7U3 371 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 YWHAQP27348 245 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 L1CAMP32004 1257 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 CTNNB1P35222 781 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 RDXP35241 583 aaKnown RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 PTGIRP43119 386 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 TUFMP49411 452 aaKnown RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 ERVFC1P60507 584 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 DEUP1Q05D60 604 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 MMRN1Q13201 1228 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 DPYSL3Q14195 570 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 SMC1AQ14683 1233 aaKnown RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 KCTD19Q17RG1 926 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 ERMARDQ5T6L9 678 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 DENND5BQ6ZUT9 1274 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 MON1AQ86VX9 555 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 FAM131BQ86XD5 332 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 C12orf50Q8NA57 414 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 KCTD6Q8NC69 237 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 SLC7A14Q8TBB6 771 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 C1orf54Q8WWF1 131 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 ANKRD7Q92527 254 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 KCTD15Q96SI1 283 aaPredicted RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 PLVAPQ9BX97 442 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 PARD6BQ9BYG5 372 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 DCLK3Q9C098 648 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 MTIF3Q9H2K0 278 aaKnown RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 FBXO44Q9H4M3 255 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 ALG13Q9NP73 1137 aaKnown RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 ABCC13Q9NSE7 274 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 RRN3Q9NYV6 651 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 HSFX1Q9UBD0 423 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 DMGDHQ9UI17 866 aaKnown RBP10.52□□□□□ -0.73
HDAC6-226ENST00000483656 FZD10Q9ULW2 581 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 STAP1Q9ULZ2 295 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 EFR3BQ9Y2G0 817 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 PLXNA4Q9HCM2 1894 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 GREB1Q4ZG55 1949 aa10.52□□□□□ -0.73
HDAC6-226ENST00000483656 CHD9Q3L8U1 2897 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 SYNJ2BP-COX16A0A087WUM0 186 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 C5orf67F2Z3F1 127 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 CXCL14O95715 111 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 HMGA1P17096 107 aaKnown RBP10.51□□□□□ -0.73
HDAC6-226ENST00000483656 ADRA1BP35368 520 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 COILP38432 576 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-226ENST00000483656 CXCR3P49682 368 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 CDH6P55285 790 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 SLC7A5Q01650 507 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 TAF10Q12962 218 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 NME3Q13232 169 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 PDK2Q15119 407 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 DPYSL2Q16555 572 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 TFDP3Q5H9I0 405 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 ZFYVE27Q5T4F4 411 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 BTBD8Q5XKL5 378 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 KAZNQ674X7 775 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 MSANTD2Q6P1R3 559 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 LILRA6Q6PI73 481 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 BBS12Q6ZW61 710 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 TCEAL8Q8IYN2 117 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 PYROXD2Q8N2H3 581 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 PQLC3Q8N755 202 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 ATG4AQ8WYN0 398 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 CASP10Q92851 521 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 FBXO32Q969P5 355 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 MAGOHBQ96A72 148 aaKnown RBP10.51□□□□□ -0.73
HDAC6-226ENST00000483656 FAF2Q96CS3 445 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 CEP295NLQ96MC4 621 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 KLHL5Q96PQ7 755 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 HINFPQ9BQA5 517 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 PLEKHA4Q9H4M7 779 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 SLITRK6Q9H5Y7 841 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 LRRC19Q9H756 370 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 CYP4F11Q9HBI6 524 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 DDIT4Q9NX09 232 aa10.51□□□□□ -0.73
HDAC6-226ENST00000483656 COX16Q9P0S2 106 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms