RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 ID2Q02363 134 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 CFHR1Q03591 330 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 CLCA4Q14CN2 919 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 COBLL1Q53SF7 1204 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 C16orf71Q8IYS4 520 aaPredicted RBP4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 KRT78Q8N1N4 520 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 SDR16C5Q8N3Y7 309 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 NRACQ8N912 160 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 NSMCE1Q8WV22 266 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 PHKBQ93100 1093 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 KAZALD1Q96I82 304 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 HIC2Q96JB3 615 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 SARGQ9BW04 601 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 DNAJB11Q9UBS4 358 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 ITGB1BP2Q9UKP3 347 aa4.36□□□□□ -1.71
NSMCE4A-210ENST00000483541 RHPN2P1A8MT19 583 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 F8W8V4 182 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 AGPSO00116 658 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 RAB27BO00194 218 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 ADRA1DP25100 572 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 MCM5P33992 734 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 THBS4P35443 961 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 GNALP38405 381 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 CARSP49589 748 aaKnown RBP4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 RPS13P62277 151 aaKnown RBP4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 ZNF91Q05481 1191 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 RAPGEF1Q13905 1077 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 MFSD13AQ14CX5 517 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 SAFBQ15424 915 aaKnown RBP eCLIP4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 SEC23BQ15437 767 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 PLAG1Q6DJT9 500 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 USP49Q70CQ1 688 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 PIP4P1Q86T03 277 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 SAMD14Q8IZD0 417 aaPredicted RBP4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 HIST1H2AAQ96QV6 131 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 STRBPQ96SI9 672 aaKnown RBP4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 EBF3Q9H4W6 596 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 PNPLA8Q9NP80 782 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 MID2Q9UJV3 735 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 RIMKLBQ9ULI2 386 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 FZD4Q9ULV1 537 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 SPATA31A1Q5TZJ5 1347 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 CACNA1IQ9P0X4 2223 aa4.35□□□□□ -1.71
NSMCE4A-210ENST00000483541 FAM90A10PA6NDY2 464 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 CTSAP10619 480 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 TRIM27P14373 513 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 ITGA8P53708 1063 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 GPC5P78333 572 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 STK3Q13188 491 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 HLTFQ14527 1009 aaKnown RBP eCLIP4.34□□□□□ -1.717e-6■■□□□ 12.4
NSMCE4A-210ENST00000483541 FAM110CQ1W6H9 321 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 AWAT1Q58HT5 328 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 UNC13DQ70J99 1090 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 ZDHHC17Q8IUH5 632 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 METTL25Q8N6Q8 603 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 FAM71DQ8N9W8 422 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 MPLKIPQ8TAP9 179 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 SNX22Q96L94 193 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 UNKQ9C0B0 810 aaKnown RBP4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 POT1Q9NUX5 634 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 GEMIN8Q9NWZ8 242 aaKnown RBP4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 SEMA5BQ9P283 1151 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 VPS51Q9UID3 782 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 COL15A1P39059 1388 aa4.34□□□□□ -1.71
NSMCE4A-210ENST00000483541 FOXN3O00409 490 aaPredicted RBP4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 ADAM10O14672 748 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 APAF1O14727 1248 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 KPNA5O15131 536 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 OAZ2O95190 189 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 IL18RAPO95256 599 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 MT-ND5P03915 603 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 SLC5A1P13866 664 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 PIK3CBP42338 1070 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 ME1P48163 572 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 COPAP53621 1224 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 EIF4A1P60842 406 aaKnown RBP4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 TXNL4AP83876 142 aaKnown RBP4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 DEUP1Q05D60 604 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 DAG1Q14118 895 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 PFKFB3Q16875 520 aaPredicted RBP4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 TRIM71Q2Q1W2 868 aaKnown RBP4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 CC2D1BQ5T0F9 858 aaKnown RBP4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 MANEALQ5VSG8 457 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 KSR2Q6VAB6 950 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 ANKRD13BQ86YJ7 626 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 BCAS4Q8TDM0 211 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 ZFYVE19Q96K21 471 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 FAM227BQ96M60 508 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 CINPQ9BW66 212 aaPredicted RBP4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 BRIP1Q9BX63 1249 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 ZNF212Q9UDV6 495 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 ASAP1Q9ULH1 1129 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 SLC27A6Q9Y2P4 619 aa4.33□□□□□ -1.72
NSMCE4A-210ENST00000483541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.32□□□□□ -1.72
NSMCE4A-210ENST00000483541 PMM2O15305 246 aa4.32□□□□□ -1.72
NSMCE4A-210ENST00000483541 PRC1O43663 620 aa4.32□□□□□ -1.72
NSMCE4A-210ENST00000483541 CAND2O75155 1236 aa4.32□□□□□ -1.72
NSMCE4A-210ENST00000483541 ANXA2P07355 339 aaKnown RBP4.32□□□□□ -1.72
NSMCE4A-210ENST00000483541 CD63P08962 238 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms