RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 PQLC3Q8N755 202 aa12.4□□□□□ -0.42
SND1-210ENST00000483503 FAM71DQ8N9W8 422 aa12.4□□□□□ -0.42
SND1-210ENST00000483503 GLIS1Q8NBF1 620 aa12.4□□□□□ -0.42
SND1-210ENST00000483503 PCDH19Q8TAB3 1148 aa12.4□□□□□ -0.42
SND1-210ENST00000483503 UHMK1Q8TAS1 419 aaKnown RBP12.4□□□□□ -0.42
SND1-210ENST00000483503 EPS8L3Q8TE67 593 aaKnown RBP12.4□□□□□ -0.42
SND1-210ENST00000483503 NT5C3BQ969T7 300 aa12.4□□□□□ -0.42
SND1-210ENST00000483503 SUSD3Q96L08 255 aa12.4□□□□□ -0.42
SND1-210ENST00000483503 NPY6RQ99463 290 aa12.4□□□□□ -0.42
SND1-210ENST00000483503 PNPLA8Q9NP80 782 aa12.4□□□□□ -0.42
SND1-210ENST00000483503 GPATCH2LQ9NWQ4 482 aa12.4□□□□□ -0.42
SND1-210ENST00000483503 SAE1Q9UBE0 346 aaPredicted RBP12.4□□□□□ -0.42
SND1-210ENST00000483503 FZD10Q9ULW2 581 aa12.4□□□□□ -0.42
SND1-210ENST00000483503 SF3B1O75533 1304 aaKnown RBP eCLIP12.39□□□□□ -0.43
SND1-210ENST00000483503 SMIM23A6NLE4 172 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 KBTBD13C9JR72 458 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 CHADO15335 359 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 POMCP01189 267 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 DAOAP59103 153 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 RNASELQ05823 741 aaKnown RBP12.39□□□□□ -0.43
SND1-210ENST00000483503 DEUP1Q05D60 604 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 CCDC142Q17RM4 750 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 ARL13BQ3SXY8 428 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 DCAF6Q58WW2 860 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 INTS6LQ5JSJ4 861 aaKnown RBP12.39□□□□□ -0.43
SND1-210ENST00000483503 EFHC2Q5JST6 749 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 RAB41Q5JT25 222 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 FAM171BQ6P995 826 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 PDZD4Q76G19 769 aaPredicted RBP12.39□□□□□ -0.43
SND1-210ENST00000483503 PRUNE1Q86TP1 453 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 SPATS2Q86XZ4 545 aaKnown RBP12.39□□□□□ -0.43
SND1-210ENST00000483503 TDRPQ86YL5 185 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 NAT8LQ8N9F0 302 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 ATP11CQ8NB49 1132 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 BCAS4Q8TDM0 211 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 RSPH1Q8WYR4 309 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 CPT1BQ92523 772 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 NTAN1Q96AB6 310 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 PGAP3Q96FM1 320 aaPredicted RBP12.39□□□□□ -0.43
SND1-210ENST00000483503 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 KCTD15Q96SI1 283 aaPredicted RBP12.39□□□□□ -0.43
SND1-210ENST00000483503 SMOQ99835 787 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 ULBP1Q9BZM6 244 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 KLC2Q9H0B6 622 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 CSNK1G1Q9HCP0 422 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 DMAP1Q9NPF5 467 aaPredicted RBP12.39□□□□□ -0.43
SND1-210ENST00000483503 STARD7Q9NQZ5 370 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 DNAJC17Q9NVM6 304 aaKnown RBP12.39□□□□□ -0.43
SND1-210ENST00000483503 FETUBQ9UGM5 382 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 PCDHB8Q9UN66 801 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 INPP5FQ9Y2H2 1132 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 ACTL7BQ9Y614 415 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 RAD54BQ9Y620 910 aa12.39□□□□□ -0.43
SND1-210ENST00000483503 MYBPHLA2RUH7 354 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 E7ESA3 106 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 TMEM189-UBE2V1I3L0A0 370 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 ARVCFO00192 962 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 KCNN4O15554 427 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 TRAPPC3O43617 180 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 FKTNO75072 461 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 SPAG6O75602 509 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 STK10O94804 968 aaKnown RBP12.38□□□□□ -0.43
SND1-210ENST00000483503 LTFP02788 710 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 INHAP05111 366 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 AFF1P51825 1210 aaKnown RBP12.38□□□□□ -0.43
SND1-210ENST00000483503 GDF10P55107 478 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 BASP1P80723 227 aaKnown RBP12.38□□□□□ -0.43
SND1-210ENST00000483503 FAM189BP81408 668 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 GUCY1A3Q02108 690 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 PDIA2Q13087 525 aaKnown RBP12.38□□□□□ -0.43
SND1-210ENST00000483503 BFSP2Q13515 415 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 RASA2Q15283 850 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 CA9Q16790 459 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 RAB6CQ53S08 254 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 SLC45A4Q5BKX6 768 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 KIAA0319Q5VV43 1072 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 OVOS1Q6IE37 1185 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 NPNTQ6UXI9 565 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 C4orf50Q6ZRC1 276 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 B4GALNT4Q76KP1 1039 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 BEND5Q7L4P6 421 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 BNIPLQ7Z465 357 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 ZC3H18Q86VM9 953 aaKnown RBP12.38□□□□□ -0.43
SND1-210ENST00000483503 C3orf58Q8NDZ4 430 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 PYROXD1Q8WU10 500 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 C9orf72Q96LT7 481 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 CSPG4P5Q96PW8 444 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 RAB6CQ9H0N0 254 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 VPS37BQ9H9H4 285 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 USP29Q9HBJ7 922 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 SLC24A2Q9UI40 661 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 XPO7Q9UIA9 1087 aaKnown RBP12.38□□□□□ -0.43
SND1-210ENST00000483503 PHF24Q9UPV7 400 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 HEY1Q9Y5J3 304 aa12.38□□□□□ -0.43
SND1-210ENST00000483503 TIMM13Q9Y5L4 95 aaPredicted RBP12.38□□□□□ -0.43
SND1-210ENST00000483503 EXOC1LA0A1B0GW35 172 aa12.37□□□□□ -0.43
SND1-210ENST00000483503 A0A1W2PQ45 241 aaPredicted RBP12.37□□□□□ -0.43
SND1-210ENST00000483503 A0A1W2PQY0 241 aa12.37□□□□□ -0.43
SND1-210ENST00000483503 GMNCA6NCL1 334 aa12.37□□□□□ -0.43
SND1-210ENST00000483503 M0QYT0 321 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms