RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 ARL14EPQ8N8R7 260 aaPredicted RBP10.1□□□□□ -0.79
HMG20B-210ENST00000483417 TC2NQ8N9U0 490 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 SPC24Q8NBT2 197 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 SLC30A5Q8TAD4 765 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 CLEC4CQ8WTT0 213 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 AGPAT1Q99943 283 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 FAM126AQ9BYI3 521 aaPredicted RBP10.1□□□□□ -0.79
HMG20B-210ENST00000483417 UBXN6Q9BZV1 441 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 RNF38Q9H0F5 515 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 EBF3Q9H4W6 596 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 NMUR1Q9HB89 426 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 C2orf42Q9NWW7 574 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 OSER1Q9NX31 292 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 PCDHGC3Q9UN70 934 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 ARHGAP26Q9UNA1 814 aa10.1□□□□□ -0.79
HMG20B-210ENST00000483417 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.1□□□□□ -0.797e-8■■□□□ 12.2
HMG20B-210ENST00000483417 ZFHX2Q9C0A1 2572 aaPredicted RBP10.1□□□□□ -0.79
HMG20B-210ENST00000483417 ANAPC1Q9H1A4 1944 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 TRAV19A0A0A6YYK7 116 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 GOLGA6L3A6NEY3 463 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 DDX3XO00571 662 aaKnown RBP eCLIP10.09□□□□□ -0.79
HMG20B-210ENST00000483417 XPO1O14980 1071 aaKnown RBP10.09□□□□□ -0.79
HMG20B-210ENST00000483417 TRIM66O15016 1216 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 TBX18O95935 607 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 CYP1A1P04798 512 aaPredicted RBP10.09□□□□□ -0.79
HMG20B-210ENST00000483417 HOXA6P31267 233 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 HOXC13P31276 330 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 PPP3CCP48454 512 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 RPL34P49207 117 aaKnown RBP10.09□□□□□ -0.79
HMG20B-210ENST00000483417 CCR3P51677 355 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 TKTL1P51854 596 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 SLC5A3P53794 718 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 BPIFB4P59827 614 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 SLC7A9P82251 487 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 CDR2Q01850 454 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 BST2Q10589 180 aaKnown RBP10.09□□□□□ -0.79
HMG20B-210ENST00000483417 USP4Q13107 963 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 LRRC32Q14392 662 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 MTF1Q14872 753 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 PON2Q15165 354 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 PDGFRLQ15198 375 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 TAF5Q15542 800 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 ASIC2Q16515 512 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 RAB41Q5JT25 222 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 FSTL4Q6MZW2 842 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 Q6ZS52 159 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 DCLK2Q8N568 766 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 KIAA1958Q8N8K9 716 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 C1orf131Q8NDD1 294 aaKnown RBP10.09□□□□□ -0.79
HMG20B-210ENST00000483417 OR8K1Q8NGG5 319 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 OSCP1Q8WVF1 389 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 ATRIPQ8WXE1 791 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 CPXM1Q96SM3 734 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 SLC4A5Q9BY07 1137 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 MIS12Q9H081 205 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 LHX5Q9H2C1 402 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 EPC1Q9H2F5 836 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 LINC00597Q9H2U6 94 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 DMAP1Q9NPF5 467 aaPredicted RBP10.09□□□□□ -0.79
HMG20B-210ENST00000483417 ARHGAP20Q9P2F6 1191 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 NUDT5Q9UKK9 219 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 USP3Q9Y6I4 520 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 CFAP54Q96N23 3096 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 F5P12259 2224 aa10.09□□□□□ -0.79
HMG20B-210ENST00000483417 FAM92AA1XBS5 289 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 PAPSS1O43252 624 aaPredicted RBP10.08□□□□□ -0.8
HMG20B-210ENST00000483417 MED7O43513 233 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 OAS1P00973 400 aaKnown RBP10.08□□□□□ -0.8
HMG20B-210ENST00000483417 ERBB2P04626 1255 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 FYNP06241 537 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 CKMP06732 381 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 TPM3P06753 285 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 UNGP13051 313 aaPredicted RBP10.08□□□□□ -0.8
HMG20B-210ENST00000483417 FERP16591 822 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 TNFAIP3P21580 790 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 TGM1P22735 817 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 ANXA13P27216 316 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 YWHAQP27348 245 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 HNRNPH3P31942 346 aaKnown RBP10.08□□□□□ -0.8
HMG20B-210ENST00000483417 GJA4P35212 333 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 EIF4A3P38919 411 aaKnown RBP10.08□□□□□ -0.8
HMG20B-210ENST00000483417 PRKCIP41743 596 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 PLA2G4AP47712 749 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 GALK1P51570 392 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 BCAT1P54687 386 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 NRLP54845 237 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 DMWDQ09019 674 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 KLHL30Q0D2K2 578 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 PTP4A2Q12974 167 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 GSE1Q14687 1217 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 GAB4Q2WGN9 574 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 EML3Q32P44 896 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 PTPN20Q4JDL3 420 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 SNX30Q5VWJ9 437 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 NAA35Q5VZE5 725 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 NAIF1Q69YI7 327 aaPredicted RBP10.08□□□□□ -0.8
HMG20B-210ENST00000483417 PM20D1Q6GTS8 502 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 PKN3Q6P5Z2 889 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 TMEM110Q86TL2 294 aa10.08□□□□□ -0.8
HMG20B-210ENST00000483417 SH3RF2Q8TEC5 729 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms