RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 WIPF2Q8TF74 440 aaPredicted RBP3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 HIC2Q96JB3 615 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 CAMK1GQ96NX5 476 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 HIST1H2AAQ96QV6 131 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 SCNM1Q9BWG6 230 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 TM2D2Q9BX73 214 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 CHST8Q9H2A9 424 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 DHX36Q9H2U1 1008 aaKnown RBP3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 STEAP1Q9UHE8 339 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 FZD4Q9ULV1 537 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 MAFFQ9ULX9 164 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 SLC27A6Q9Y2P4 619 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 RRHO14718 337 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 INPPL1O15357 1258 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 FRS3O43559 492 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 TXNP10599 105 aaKnown RBP3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 YY1P25490 414 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 EIF4A1P60842 406 aaKnown RBP3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 FMO1Q01740 532 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 SESTD1Q86VW0 696 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 FAM71DQ8N9W8 422 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 PRR11Q96HE9 360 aaPredicted RBP3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 TRMOQ9BU70 441 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 MLXIPLQ9NP71 852 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 ZBTB40Q9NUA8 1239 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 DKK4Q9UBT3 224 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 ITGB1BP2Q9UKP3 347 aa3.72□□□□□ -1.81
LAPTM4A-202ENST00000483117 AQP7P3A6NL99 342 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 C2CD4BA6NLJ0 364 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 B4DGG1 531 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 TULP3O75386 442 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 BTF3P20290 206 aaKnown RBP3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 TNFRSF1BP20333 461 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 TXNL4AP83876 142 aaKnown RBP3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 HSF1Q00613 529 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 ST3GAL2Q16842 350 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 EARS2Q5JPH6 523 aaKnown RBP3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 PLAG1Q6DJT9 500 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 GRHL2Q6ISB3 625 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 ZNF793Q6ZN11 406 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 UNC13DQ70J99 1090 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 UBE2Q1Q7Z7E8 422 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 YAF2Q8IY57 180 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 SMCR8Q8TEV9 937 aaPredicted RBP3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 TRMT61AQ96FX7 289 aaKnown RBP3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 VPS50Q96JG6 964 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 LYZL4Q96KX0 146 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 NUAK2Q9H093 628 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 FAM234AQ9H0X4 552 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 AS3MTQ9HBK9 375 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 METTL14Q9HCE5 456 aaKnown RBP3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 VPS45Q9NRW7 570 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 DNAJB11Q9UBS4 358 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 VPS51Q9UID3 782 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 OGDHLQ9ULD0 1010 aa3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 THRAP3Q9Y2W1 955 aaKnown RBP3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 SIRT4Q9Y6E7 314 aaPredicted RBP3.71□□□□□ -1.82
LAPTM4A-202ENST00000483117 C16orf96A6NNT2 1141 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 SNX2O60749 519 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 MAP4K4O95819 1239 aaPredicted RBP3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 PLAUP00749 431 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 MBPP02686 304 aaPredicted RBP3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 GALNSP34059 522 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 HTR7P34969 479 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 CARSP49589 748 aaKnown RBP3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 COPAP53621 1224 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 CCDC15Q0P6D6 951 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 ERV3-1Q14264 604 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 SEMA3AQ14563 771 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 FAM110CQ1W6H9 321 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 MINDY4Q4G0A6 757 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 ARHGAP29Q52LW3 1261 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 MANEALQ5VSG8 457 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 RNF220Q5VTB9 566 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 CXorf57Q6NSI4 855 aaKnown RBP3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 ZNF549Q6P9A3 640 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 NOL8Q76FK4 1167 aaKnown RBP3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 TFAP2DQ7Z6R9 452 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 P3H2Q8IVL5 708 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 MMP21Q8N119 569 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 PELI3Q8N2H9 469 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 LRTOMTQ8WZ04 291 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 ZNF668Q96K58 619 aaPredicted RBP3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 HIPK2Q9H2X6 1198 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 FAM83DQ9H4H8 585 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 SAP30LQ9HAJ7 183 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 ZNF287Q9HBT7 754 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 AGO4Q9HCK5 861 aaKnown RBP3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 C1orf112Q9NSG2 853 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 ARL8BQ9NVJ2 186 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 WWOXQ9NZC7 414 aa3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 DDX20Q9UHI6 824 aaKnown RBP3.7□□□□□ -1.82
LAPTM4A-202ENST00000483117 FAM90A8PA6NJQ4 464 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 PRR23D1E9PI22 279 aaPredicted RBP3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 SMAD6O43541 496 aaKnown RBP3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 FGF2P09038 288 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 FAM90A13PP0C7W8 464 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 FAM90A24PP0C7X0 464 aa3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 PRR23D2P0DMB1 279 aaPredicted RBP3.69□□□□□ -1.82
LAPTM4A-202ENST00000483117 TMEM225BP0DP42 221 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms