RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 KRT39Q6A163 491 aa17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 TRMT11Q7Z4G4 463 aaKnown RBP17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 MIB1Q86YT6 1006 aa17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 SMYD4Q8IYR2 804 aaPredicted RBP17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 DUSP16Q9BY84 665 aa17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 GDPD2Q9HCC8 539 aa17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 WDR35Q9P2L0 1181 aa17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 MBD1Q9UIS9 605 aaPredicted RBP17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 DNMT3LQ9UJW3 386 aa17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 HCN2Q9UL51 889 aa17.46■□□□□ 0.39
RAB11FIP3-209ENST00000483002 HOXB2P14652 356 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 NTSR1P30989 418 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 GTF2H1P32780 548 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 PTGER3P43115 390 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ENPEPQ07075 957 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 EGFLAMQ63HQ2 1017 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 SDE2Q6IQ49 451 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 PSAPL1Q6NUJ1 521 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 SCD5Q86SK9 330 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CHPFQ8IZ52 775 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 SEMA4DQ92854 862 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 BHMTQ93088 406 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ERLEC1Q96DZ1 483 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ACOX2Q99424 681 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 PNPLA8Q9NP80 782 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 TMEM9BQ9NQ34 198 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ANGPTL2Q9UKU9 493 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 STARD13Q9Y3M8 1113 aa17.45■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CACNG3O60359 315 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 KRT37O76014 449 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 RALAP11233 206 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 GABRG2P18507 467 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 PMLP29590 882 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 PSEN1P49768 467 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 NOVA1P51513 510 aaKnown RBP17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ZCWPW2Q504Y3 356 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 KLHDC10Q6PID8 442 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 TOGARAM2Q6ZUX3 1019 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CCDC186Q7Z3E2 898 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 DEFB119Q8N690 84 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 TMEM74BQ9NUR3 256 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 PLK2Q9NYY3 685 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 MARK1Q9P0L2 795 aa17.44■□□□□ 0.38
RAB11FIP3-209ENST00000483002 LAMA1P25391 3075 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 PRRT4C9JH25 899 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CDX4O14627 284 aaPredicted RBP17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 GIPC1O14908 333 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CETN3O15182 167 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ZBTB24O43167 697 aaPredicted RBP17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 STC2O76061 302 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 MXI1P50539 228 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 EDRF1Q3B7T1 1238 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 UAP1L1Q3KQV9 507 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 TRIM61Q5EBN2 209 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 TADA2BQ86TJ2 420 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 SYT12Q8IV01 421 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 FBXL13Q8NEE6 735 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 TATDN2Q93075 761 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CCDC34Q96HJ3 373 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 TMEM176AQ96HP8 235 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CISHQ9NSE2 258 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 RAB20Q9NX57 234 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 USP3Q9Y6I4 520 aa17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ASCC3Q8N3C0 2202 aaKnown RBP17.43■□□□□ 0.38
RAB11FIP3-209ENST00000483002 A0A1W2PQF6 199 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 STX10O60499 249 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 HMBSP08397 361 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 EPB41P11171 864 aaKnown RBP17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 DGKGP49619 791 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 RAD23BP54727 409 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 PNOCQ13519 176 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ST3GAL2Q16842 350 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 SH3PXD2AQ5TCZ1 1133 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 LYSMD4Q5XG99 296 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 Q6ZNB5 142 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 TTC39CQ8N584 583 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 SLC4A11Q8NBS3 891 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ARID3AQ99856 593 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 NUSAP1Q9BXS6 441 aaKnown RBP17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CLIC5Q9NZA1 410 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CALCOCO1Q9P1Z2 691 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 EVLQ9UI08 416 aaPredicted RBP17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 RASAL2Q9UJF2 1139 aa17.42■□□□□ 0.38
RAB11FIP3-209ENST00000483002 AP5Z1O43299 807 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 KLKB1P03952 638 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CISD3P0C7P0 127 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ITPKAP23677 461 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 PRCPP42785 496 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 MCCD1P59942 119 aaPredicted RBP17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 COG7P83436 770 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 RPL6Q02878 288 aaKnown RBP17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 EFEMP1Q12805 493 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 SPDYCQ5MJ68 293 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 TCERG1LQ5VWI1 586 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 KIAA1211LQ6NV74 962 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 PIGZQ86VD9 579 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 ZNF276Q8N554 614 aa17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 IPO4Q8TEX9 1081 aaKnown RBP17.41■□□□□ 0.38
RAB11FIP3-209ENST00000483002 CDK5RAP1Q96SZ6 601 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms