RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 TGM1P22735 817 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 ATP5C1P36542 298 aaKnown RBP13.48□□□□□ -0.25
COL21A1-209ENST00000482933 PXNP49023 591 aaPredicted RBP13.48□□□□□ -0.25
COL21A1-209ENST00000482933 MRPS21P82921 87 aaKnown RBP13.48□□□□□ -0.25
COL21A1-209ENST00000482933 RSPO4Q2I0M5 234 aaPredicted RBP13.48□□□□□ -0.25
COL21A1-209ENST00000482933 GAB4Q2WGN9 574 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 PPP1R26Q5T8A7 1209 aaPredicted RBP13.48□□□□□ -0.25
COL21A1-209ENST00000482933 BTBD8Q5XKL5 378 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 DGLUCYQ7Z3D6 616 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 TADA2BQ86TJ2 420 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 USP33Q8TEY7 942 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 ERCC4Q92889 916 aaPredicted RBP13.48□□□□□ -0.25
COL21A1-209ENST00000482933 JAKMIP2Q96AA8 810 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 TMEM176AQ96HP8 235 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 DHTKD1Q96HY7 919 aaPredicted RBP13.48□□□□□ -0.25
COL21A1-209ENST00000482933 LOXL4Q96JB6 756 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 HEXIM2Q96MH2 286 aaKnown RBP13.48□□□□□ -0.25
COL21A1-209ENST00000482933 HHIPQ96QV1 700 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 METTL14Q9HCE5 456 aaKnown RBP13.48□□□□□ -0.25
COL21A1-209ENST00000482933 CYLDQ9NQC7 956 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 CISHQ9NSE2 258 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 EBF1Q9UH73 591 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 COQ4Q9Y3A0 265 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 MYO16Q9Y6X6 1858 aa13.48□□□□□ -0.25
COL21A1-209ENST00000482933 A0A0A0MRY4 1105 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 K7EQS6 105 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 SCAMP3O14828 347 aaKnown RBP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 KAT7O95251 611 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 HOXC13P31276 330 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 SLC6A11P48066 632 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 KIF11P52732 1056 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 SEC13P55735 322 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 SLC8A3P57103 927 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 YWHAEP62258 255 aaKnown RBP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 HSF5Q4G112 596 aaPredicted RBP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 LY6G5CQ5SRR4 150 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 KLHDC10Q6PID8 442 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 GPRIN1Q7Z2K8 1008 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 BBS7Q8IWZ6 715 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 TSTD1Q8NFU3 115 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 MRGPRX2Q96LB1 330 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 CDK5RAP1Q96SZ6 601 aaKnown RBP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 PARD6AQ9NPB6 346 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 ARHGEF4Q9NR80 690 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 SPHK2Q9NRA0 654 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 SEMA4GQ9NTN9 838 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 ARMCX3Q9UH62 379 aaPredicted RBP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 LSM7Q9UK45 103 aaKnown RBP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 ZNF292O60281 2723 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 TRIM49BA6NDI0 452 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 CYP26A1O43174 497 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 IRF1P10914 325 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 RALAP11233 206 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 RARGP13631 454 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 GRIA2P42262 883 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 CSRP2Q16527 193 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 CBWD6Q4V339 395 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 C2orf27AQ580R0 203 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 CBWD3Q5JTY5 395 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 CBWD5Q5RIA9 395 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 ARHGAP17Q68EM7 881 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 HTR3DQ70Z44 454 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 SLC4A11Q8NBS3 891 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 CEP63Q96MT8 703 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 KLF16Q9BXK1 252 aaPredicted RBP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 UBXN6Q9BZV1 441 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 POLR3BQ9NW08 1133 aaPredicted RBP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 DNMT3LQ9UJW3 386 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 CDV3Q9UKY7 258 aaKnown RBP13.47□□□□□ -0.25
COL21A1-209ENST00000482933 MMP17Q9ULZ9 603 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 PCDHGC3Q9UN70 934 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 USP3Q9Y6I4 520 aa13.47□□□□□ -0.25
COL21A1-209ENST00000482933 KIAA1549LQ6ZVL6 1849 aa13.46□□□□□ -0.25
COL21A1-209ENST00000482933 GPR179Q6PRD1 2367 aa13.46□□□□□ -0.25
COL21A1-209ENST00000482933 DCHS1Q96JQ0 3298 aa13.46□□□□□ -0.25
COL21A1-209ENST00000482933 A0A1W2PQH9 124 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 HOXC11O43248 304 aaPredicted RBP13.46□□□□□ -0.26
COL21A1-209ENST00000482933 ALDH1A2O94788 518 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 TBX18O95935 607 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 TBXAS1P24557 533 aaPredicted RBP13.46□□□□□ -0.26
COL21A1-209ENST00000482933 TNFRSF4P43489 277 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 PLA2G4AP47712 749 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 PGFP49763 221 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 DGKEP52429 567 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 RAD23BP54727 409 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 CRY1Q16526 586 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 ANO4Q32M45 955 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 CCDC186Q7Z3E2 898 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 C12orf40Q86WS4 652 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 ZNF276Q8N554 614 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 ANKRD52Q8NB46 1076 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 SLC35C1Q96A29 364 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 ZNF775Q96BV0 537 aaPredicted RBP13.46□□□□□ -0.26
COL21A1-209ENST00000482933 ZC3H10Q96K80 434 aaKnown RBP13.46□□□□□ -0.26
COL21A1-209ENST00000482933 RTKNQ9BST9 563 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 OSER1Q9NX31 292 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 DEC1Q9P2X7 70 aa13.46□□□□□ -0.26
COL21A1-209ENST00000482933 NAGPAQ9UK23 515 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms