RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, human

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPGR-208	ENST00000482855	EHMT1	Q9H9B1	1298 aa		11.43	□□□□□ -0.58
RPGR-208	ENST00000482855	GPRC5C	Q9NQ84	441 aa		11.43	□□□□□ -0.58
RPGR-208	ENST00000482855	HOMER2	Q9NSB8	354 aa		11.43	□□□□□ -0.58
RPGR-208	ENST00000482855	PADI4	Q9UM07	663 aa		11.43	□□□□□ -0.58
RPGR-208	ENST00000482855	LOC100653049	A0A140TA62	436 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855		H0YIN7	160 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	KRT34	O76011	436 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	KRT38	O76015	456 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	NDUFB10	O96000	172 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	P4HB	P07237	508 aa	Known RBP	11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	IDO1	P14902	403 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	POR	P16435	677 aa	Predicted RBP	11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	DPEP1	P16444	411 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	L1CAM	P32004	1257 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	DPYSL3	Q14195	570 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	FAM71D	Q8N9W8	422 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	HAUS8	Q9BT25	410 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	PNPLA8	Q9NP80	782 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	PKD2L1	Q9P0L9	805 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	ARHGAP26	Q9UNA1	814 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	GNE	Q9Y223	722 aa	Known RBP	11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	ADAMTSL1	Q8N6G6	1762 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	ZNF646	O15015	1829 aa	Predicted RBP	11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	SH3PXD2B	A1X283	911 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	LYPLA1	O75608	230 aa	Predicted RBP	11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	OAT	P04181	439 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	HSPA13	P48723	471 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	GTF2I	P78347	998 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	PIGH	Q14442	188 aa	Predicted RBP	11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	PDPK2P	Q6A1A2	396 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	PACS1	Q6VY07	963 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855		Q6ZNX1	250 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	AMIGO2	Q86SJ2	522 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	MAP4K3	Q8IVH8	894 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	GMCL1	Q96IK5	515 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	TRIM56	Q9BRZ2	755 aa	Known RBP	11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	YIPF2	Q9BWQ6	316 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	PLGRKT	Q9HBL7	147 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	TTLL3	Q9Y4R7	772 aa		11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.42	□□□□□ -0.58
RPGR-208	ENST00000482855	CXorf49	A8MYA2	514 aa	Predicted RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	FAM189A1	O60320	539 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	CALB1	P05937	261 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	MYL4	P12829	197 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	NCF2	P19878	526 aa	Predicted RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	MMP8	P22894	467 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	CRHR1	P34998	444 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	OGDH	Q02218	1023 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	PEX6	Q13608	980 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	ADGRE1	Q14246	886 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	C6orf52	Q5T4I8	152 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	SYCP2L	Q5T4T6	812 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	FAM102B	Q5T8I3	360 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	GRAMD4	Q6IC98	578 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	SPOPL	Q6IQ16	392 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	FRMD7	Q6ZUT3	714 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	BBS12	Q6ZW61	710 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	RSPH3	Q86UC2	560 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	SLC35B4	Q969S0	331 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	FBXL18	Q96ME1	805 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	ZNF778	Q96MU6	729 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	RIT2	Q99578	217 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	FAM96A	Q9H5X1	160 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	PFDN4	Q9NQP4	134 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	ZBTB21	Q9ULJ3	1066 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	EFR3B	Q9Y2G0	817 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	ITM2A	O43736	263 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	CBFA2T3	O75081	653 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	AVIL	O75366	819 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	RBP3	P10745	1247 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	ACO1	P21399	889 aa	Known RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	YY1	P25490	414 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	EIF3E	P60228	445 aa	Known RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	FASTKD1	Q53R41	847 aa	Known RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	WDR78	Q5VTH9	848 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	POTEH	Q6S545	545 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	TMEM126B	Q8IUX1	230 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	GPD1L	Q8N335	351 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	TRIML2	Q8N7C3	387 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	TTLL6	Q8N841	843 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	ADCY4	Q8NFM4	1077 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	TFB1M	Q8WVM0	346 aa	Known RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	BIRC8	Q96P09	236 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	MMP19	Q99542	508 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	KIFC3	Q9BVG8	833 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	DHX33	Q9H6R0	707 aa	Known RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	RRN3	Q9NYV6	651 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	HERC5	Q9UII4	1024 aa	Known RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	C3orf70	A6NLC5	250 aa	Predicted RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	MCF2L	O15068	1137 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	ZMPSTE24	O75844	475 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	FBXO21	O94952	628 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	HLA-DRA	P01903	254 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	FUT4	P22083	530 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	SLC1A6	P48664	564 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	CDK9	P50750	372 aa	Known RBP	11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	CUL2	Q13617	745 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	ACAP1	Q15027	740 aa		11.41	□□□□□ -0.58
RPGR-208	ENST00000482855	SMTNL2	Q2TAL5	461 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms