RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 MAP3K7CLP57077 242 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 GRIK2Q13002 908 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 BIRC3Q13489 604 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 ZMIZ2Q8NF64 920 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 SETD7Q8WTS6 366 aaKnown RBP13.54□□□□□ -0.24
TMEM54-206ENST00000482771 USP28Q96RU2 1077 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 ZDHHC5Q9C0B5 715 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 SDCBP2Q9H190 292 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 MIR1-1HGQ9H1L0 117 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 FBXO44Q9H4M3 255 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 ITM2CQ9NQX7 267 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 TLR8Q9NR97 1041 aaKnown RBP13.54□□□□□ -0.24
TMEM54-206ENST00000482771 KRT82Q9NSB4 513 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 KBTBD4Q9NVX7 518 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 PLK2Q9NYY3 685 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 MARK1Q9P0L2 795 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 LSM7Q9UK45 103 aaKnown RBP13.54□□□□□ -0.24
TMEM54-206ENST00000482771 APOBEC2Q9Y235 224 aaKnown RBP13.54□□□□□ -0.24
TMEM54-206ENST00000482771 ADAMTS20P59510 1910 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 PLXND1Q9Y4D7 1925 aa13.54□□□□□ -0.24
TMEM54-206ENST00000482771 PCDH15Q96QU1 1955 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 A0A1B0GTW7 788 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 CBFA2T3O75081 653 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 CCDC130P13994 396 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 SNRPFP62306 86 aaKnown RBP13.53□□□□□ -0.24
TMEM54-206ENST00000482771 ASIC1P78348 528 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 AMPD3Q01432 767 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 GOLGA8FQ08AF8 430 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 GOLGA8DPQ0D2H9 430 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 ORC1Q13415 861 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 ZNF699Q32M78 642 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 ZNF667Q5HYK9 610 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 FAM26FQ5R3K3 315 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 SCARA5Q6ZMJ2 495 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 METTL3Q86U44 580 aaKnown RBP13.53□□□□□ -0.24
TMEM54-206ENST00000482771 MDM1Q8TC05 714 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 SLC2A14Q8TDB8 520 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 DNASE2BQ8WZ79 361 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 GPR174Q9BXC1 333 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 TNMDQ9H2S6 317 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 VRTNQ9H8Y1 702 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 PRDM16Q9HAZ2 1276 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 IL21RQ9HBE5 538 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.53□□□□□ -0.24
TMEM54-206ENST00000482771 OSER1Q9NX31 292 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 WSB2Q9NYS7 404 aaPredicted RBP13.53□□□□□ -0.24
TMEM54-206ENST00000482771 NUDT5Q9UKK9 219 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 PCOLCE2Q9UKZ9 415 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 STON1Q9Y6Q2 735 aa13.53□□□□□ -0.24
TMEM54-206ENST00000482771 MEI4A8MW99 385 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 MDM4O15151 490 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 EXOC3O60645 756 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 NCAM1P13591 858 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 SYT1P21579 422 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 PLA2G4AP47712 749 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 NCOA4Q13772 614 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 STARD3Q14849 445 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 FUT11Q495W5 492 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 CRYBG2Q8N1P7 616 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 ZCCHC9Q8N567 271 aaKnown RBP13.52□□□□□ -0.25
TMEM54-206ENST00000482771 C12orf29Q8N999 325 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 PLEKHO2Q8TD55 490 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 DHX58Q96C10 678 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 MKRN2Q9H000 416 aaKnown RBP13.52□□□□□ -0.25
TMEM54-206ENST00000482771 GAREM1Q9H706 876 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 CSNK1G1Q9HCP0 422 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 KIAA1522Q9P206 1035 aaPredicted RBP13.52□□□□□ -0.25
TMEM54-206ENST00000482771 FBXO10Q9UK96 956 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 RAXQ9Y2V3 346 aa13.52□□□□□ -0.25
TMEM54-206ENST00000482771 CELSR3Q9NYQ7 3312 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 FLNBO75369 2602 aaKnown RBP13.51□□□□□ -0.25
TMEM54-206ENST00000482771 KCNJ18B7U540 433 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 C4BPAP04003 597 aaKnown RBP13.51□□□□□ -0.25
TMEM54-206ENST00000482771 RARGP13631 454 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 ADORA2BP29275 332 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 CUL4AQ13619 759 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 E2F4Q16254 413 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 BMT2Q1RMZ1 405 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 HLA-BQ31612 363 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 C10orf120Q5SQS8 335 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 DCAF12L1Q5VU92 463 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 GLRX5Q86SX6 157 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 TMPRSS6Q8IU80 811 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 CADM4Q8NFZ8 388 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 RHBDD1Q8TEB9 315 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 JAKMIP2Q96AA8 810 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 P2RY11Q96G91 374 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 LRIG1Q96JA1 1093 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 C7orf25Q9BPX7 421 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 NMUR1Q9HB89 426 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 SLC39A2Q9NP94 309 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 CYLDQ9NQC7 956 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 DNMT3LQ9UJW3 386 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 SCML2Q9UQR0 700 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 MORC2Q9Y6X9 1032 aaPredicted RBP13.51□□□□□ -0.25
TMEM54-206ENST00000482771 PLXNB3Q9ULL4 1909 aa13.51□□□□□ -0.25
TMEM54-206ENST00000482771 GCN1Q92616 2671 aaKnown RBP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 A0A1W2PQH9 124 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 METTL12A8MUP2 240 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 BCAT2O15382 392 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms