RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 SUPT20HL1Q3ZLR7 823 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 UHRF1BP1Q6BDS2 1440 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 ZNF425Q6IV72 752 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 APOA5Q6Q788 366 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 MICU3Q86XE3 530 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 SFTPA1Q8IWL2 248 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 GALNT16Q8N428 558 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 C8orf58Q8NAV2 365 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 MAML1Q92585 1016 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 TRIM43Q96BQ3 446 aaPredicted RBP4.42□□□□□ -1.7
GTF3A-207ENST00000482655 SLC39A13Q96H72 371 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 THAP7Q9BT49 309 aaPredicted RBP4.42□□□□□ -1.7
GTF3A-207ENST00000482655 XPNPEP3Q9NQH7 507 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 SNX15Q9NRS6 342 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 STK32BQ9NY57 414 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 TBC1D30Q9Y2I9 924 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 DAAM1Q9Y4D1 1078 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 MAGI2Q86UL8 1455 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 USP19O94966 1318 aa4.42□□□□□ -1.7
GTF3A-207ENST00000482655 KDM5CP41229 1560 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 C9orf84Q5VXU9 1444 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 SCAPERQ9BY12 1400 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 RHPN2P1A8MT19 583 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 KCNU1A8MYU2 1149 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 H7C4K7 107 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 M0R3H8 397 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 FOXN3O00409 490 aaPredicted RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 IFRD1O00458 451 aaPredicted RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 PMPCBO75439 489 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 RNF8O76064 485 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 PTDSS1P48651 473 aaKnown RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 PLCD1P51178 756 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 KRTAP10-11P60412 298 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 BTKQ06187 659 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 KLF9Q13886 244 aaPredicted RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 ZNF268Q14587 947 aaPredicted RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 CNGA2Q16280 664 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 FAM187BQ17R55 369 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 RNASE12Q5GAN4 147 aaKnown RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 C10orf62Q5T681 223 aaPredicted RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 C1orf228Q6PIY5 440 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 SLC2A7Q6PXP3 512 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 ZDHHC24Q6UX98 284 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 SPICE1Q8N0Z3 855 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 KRT78Q8N1N4 520 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 NMD3Q96D46 503 aaKnown RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 CCDC138Q96M89 665 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 ARPC5LQ9BPX5 153 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 SELENOOQ9BVL4 669 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 APOL5Q9BWW9 433 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 VN1R3Q9BXE9 311 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 NAA15Q9BXJ9 866 aaKnown RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 PDGFCQ9NRA1 345 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 TAGLN3Q9UI15 199 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 BTBD3Q9Y2F9 522 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 SNX13Q9Y5W8 968 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 SETD1BQ9UPS6 1966 aaKnown RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 GOLGA3Q08378 1498 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 TCOF1Q13428 1488 aaKnown RBP4.41□□□□□ -1.7
GTF3A-207ENST00000482655 WDR17Q8IZU2 1322 aa4.41□□□□□ -1.7
GTF3A-207ENST00000482655 STRCP1A6NGW2 1772 aa4.4□□□□□ -1.7
GTF3A-207ENST00000482655 SMIM35A0A1B0GVV1 85 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 BTBD19C9JJ37 291 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 TMEM232C9JQI7 657 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 RAB27BO00194 218 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 ADAMTS3O15072 1205 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 RRP9O43818 475 aaKnown RBP4.4□□□□□ -1.71
GTF3A-207ENST00000482655 PIAS2O75928 621 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 FGAP02671 866 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 ITGA8P53708 1063 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 ARHGEF7Q14155 803 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 SLC29A2Q14542 456 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 GRAMD1BQ3KR37 738 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 C4orf46Q504U0 113 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 C3orf38Q5JPI3 329 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 TOGARAM2Q6ZUX3 1019 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 PTCHD4Q6ZW05 846 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 DPP9Q86TI2 863 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 YAF2Q8IY57 180 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 NGDNQ8NEJ9 315 aaKnown RBP4.4□□□□□ -1.71
GTF3A-207ENST00000482655 PRSS3P2Q8NHM4 247 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 ADAMTS18Q8TE60 1221 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 IPCEF1Q8WWN9 437 aaPredicted RBP4.4□□□□□ -1.71
GTF3A-207ENST00000482655 NAF1Q96HR8 494 aaKnown RBP4.4□□□□□ -1.71
GTF3A-207ENST00000482655 CCDC17Q96LX7 622 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 TBCBQ99426 244 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 FAM118BQ9BPY3 351 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 TRIM5Q9C035 493 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 PRSS22Q9GZN4 317 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 BTBD1Q9H0C5 482 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 ZNF287Q9HBT7 754 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 ARFGAP3Q9NP61 516 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 PLCB1Q9NQ66 1216 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 DNMT3BQ9UBC3 853 aaKnown RBP4.4□□□□□ -1.71
GTF3A-207ENST00000482655 SETD1AO15047 1707 aaKnown RBP4.4□□□□□ -1.71
GTF3A-207ENST00000482655 NEURL4Q96JN8 1562 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 REREQ9P2R6 1566 aa4.4□□□□□ -1.71
GTF3A-207ENST00000482655 PLCH2O75038 1416 aa4.39□□□□□ -1.71
GTF3A-207ENST00000482655 DSCR3O14972 297 aa4.39□□□□□ -1.71
GTF3A-207ENST00000482655 TP73O15350 636 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms