RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 DCAF12L1Q5VU92 463 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 PAOXQ6QHF9 649 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 KLHL17Q6TDP4 642 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 CLEC10AQ8IUN9 316 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 RUBCNQ92622 972 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 ZNF845Q96IR2 970 aaPredicted RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 WDR24Q96S15 920 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 AMNQ9BXJ7 453 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 BRD8Q9H0E9 1235 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 MID2Q9UJV3 735 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 UBA6A0AVT1 1052 aaPredicted RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 A4D1N5 150 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 RNMTO43148 476 aaKnown RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 FKTNO75072 461 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 B3GALNT1O75752 331 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 DNAJB5O75953 348 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 OR2C1O95371 312 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 HSPA1AP0DMV8 641 aaKnown RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 HSPA1BP0DMV9 641 aaKnown RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 NPPBP16860 134 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 ARFIP1P53367 373 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 CDC42EP1Q00587 391 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 SLC6A3Q01959 620 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 MPP7Q5T2T1 576 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 PRAMEF9Q5VWM5 478 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 FBXO38Q6PIJ6 1188 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 TMPRSS7Q7RTY8 843 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 KCTD20Q7Z5Y7 419 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 SLC9B2Q86UD5 537 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 CCDC28AQ8IWP9 274 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 PPP1R14CQ8TAE6 165 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 UTP15Q8TED0 518 aaKnown RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 GAB3Q8WWW8 586 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 KRT35Q92764 455 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 VPS33AQ96AX1 596 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 ASIC4Q96FT7 647 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 TUBGCP5Q96RT8 1024 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 DIAPH3Q9NSV4 1193 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 UCKL1Q9NWZ5 548 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 ZMYND8Q9ULU4 1186 aaPredicted RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 REV3LO60673 3130 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 VILLO15195 856 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 SEC24DO94855 1032 aaPredicted RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 SLC6A4P31645 630 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 CRKLP46109 303 aaKnown RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 GSK3AP49840 483 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 POLR2FP61218 127 aaKnown RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 FAM189BP81408 668 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 STK4Q13043 487 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 MTA1Q13330 715 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 SPIDRQ14159 915 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 MED22Q15528 200 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 TMEM266Q2M3C6 531 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 PRR5LQ6MZQ0 368 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 CPLX2Q6PUV4 134 aaKnown RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 C22orf34Q6ZV56 151 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 MIGA2Q7L4E1 593 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 GALNT7Q86SF2 657 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 PRPF39Q86UA1 669 aaKnown RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 ANKRD13BQ86YJ7 626 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 FAM181AQ8N9Y4 354 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 Q8NA96 180 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 ELP4Q96EB1 424 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 CNDP2Q96KP4 475 aaKnown RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 MFSD14AQ96MC6 490 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 PRPF18Q99633 342 aaKnown RBP3.6□□□□□ -1.83
SMC6-208ENST00000481708 TEX13BQ9BXU2 312 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 PCDHAC1Q9H158 963 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 GREM2Q9H772 168 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 NRIP3Q9NQ35 241 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 PIM2Q9P1W9 311 aa3.6□□□□□ -1.83
SMC6-208ENST00000481708 PLXND1Q9Y4D7 1925 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 C22orf46C9J442 243 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 TP73O15350 636 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 FOXP2O15409 715 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 ATP5BP06576 529 aaKnown RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 ITGA2BP08514 1039 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 ATP6V1E1P36543 226 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 BMPR1AP36894 532 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 STAT5AP42229 794 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 CARSP49589 748 aaKnown RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 ANTXR2P58335 489 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 PDCLQ13371 301 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 KCNAB1Q14722 419 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 NKPD1Q17RQ9 610 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 SLFN11Q7Z7L1 901 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 BCL6BQ8N143 479 aaPredicted RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 NUP93Q8N1F7 819 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 SFRP1Q8N474 314 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 FBXL6Q8N531 539 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 TAF4BQ92750 862 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 APOPT1Q96IL0 206 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 GBP4Q96PP9 640 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 RTKNQ9BST9 563 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 PITHD1Q9GZP4 211 aaPredicted RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 DNAJC18Q9H819 358 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 RXFP3Q9NSD7 469 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 TBC1D14Q9P2M4 693 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 RABL2AQ9UBK7 228 aaPredicted RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 GTF3C4Q9UKN8 822 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms