RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 SLC2A11Q9BYW1 496 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 ISCUQ9H1K1 167 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.33□□□□□ -1.562e-7■■■■■ 33.6
HDAC6-223ENST00000480525 IMPACTQ9P2X3 320 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 INTUQ9ULD6 942 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 STAP1Q9ULZ2 295 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 TLR6Q9Y2C9 796 aa5.33□□□□□ -1.56
HDAC6-223ENST00000480525 PIEZO1Q92508 2521 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 CCDC163A0A0D9SF12 145 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 TCRBV5S1A1TA0A578 114 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 LRRC53A6NM62 1247 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 HEPACAM2A8MVW5 462 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 PES1O00541 588 aaKnown RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 DPYSL4O14531 572 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 TRDMT1O14717 391 aaKnown RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF263O14978 683 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 NCAM2O15394 837 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 PAPSS1O43252 624 aaPredicted RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 DAB1O75553 588 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 GABBR2O75899 941 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 SOAT2O75908 522 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 LCA5LO95447 670 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 PRAMEF12O95522 483 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 PENKP01210 267 aaPredicted RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 RARGP13631 454 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 BRD2P25440 801 aaKnown RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 SSTR3P32745 418 aaPredicted RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 NOS2P35228 1153 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 MATKP42679 507 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 NSFP46459 744 aaKnown RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 GPR15P49685 360 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 HADHBP55084 474 aaKnown RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 OXCT1P55809 520 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 NTHL1P78549 312 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 SLC6A3Q01959 620 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 PTP4A2Q12974 167 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 NR1H3Q13133 447 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 ARHGAP44Q17R89 818 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 CCDC142Q17RM4 750 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 ITPRIPL2Q3MIP1 535 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 PTPN20Q4JDL3 420 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 DGKKQ5KSL6 1271 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 SFMBT2Q5VUG0 894 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 BSPRYQ5W0U4 402 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 BTBD8Q5XKL5 378 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 HGSNATQ68CP4 663 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 TXNDC8Q6A555 127 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 TANGO2Q6ICL3 276 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 CC2D1AQ6P1N0 951 aaPredicted RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 GJB7Q6PEY0 223 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 POTEHQ6S545 545 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 PARM1Q6UWI2 310 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 NUDT18Q6ZVK8 323 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 MON1BQ7L1V2 547 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 STRADAQ7RTN6 431 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 GPRIN1Q7Z2K8 1008 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 VSIG1Q86XK7 387 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF687Q8N1G0 1237 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 CPA6Q8N4T0 437 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 MAB21L3Q8N8X9 362 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 KDM1BQ8NB78 822 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 OR8K1Q8NGG5 319 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 SLC30A5Q8TAD4 765 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 OLIG1Q8TAK6 271 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 GIPC2Q8TF65 315 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 CENPIQ92674 756 aaPredicted RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 C1orf74Q96LT6 269 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 ZSWIM3Q96MP5 696 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 PANX2Q96RD6 677 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 CPXM1Q96SM3 734 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 NPY6RQ99463 290 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 AGPAT1Q99943 283 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 DDX50Q9BQ39 737 aaKnown RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 ULBP1Q9BZM6 244 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 XPO4Q9C0E2 1151 aaKnown RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 RNF38Q9H0F5 515 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 IRF2BPLQ9H1B7 796 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 SLITRK6Q9H5Y7 841 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 MRPL47Q9HD33 250 aaKnown RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 CD320Q9NPF0 282 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 ARHGEF3Q9NR81 526 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 ZNHIT6Q9NWK9 470 aaKnown RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 MARCH2Q9P0N8 246 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 IFNKQ9P0W0 207 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 GMIPQ9P107 970 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 LIMD1Q9UGP4 676 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 CYTH4Q9UIA0 394 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 NAGPAQ9UK23 515 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 TMEM59LQ9UK28 342 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 LSM7Q9UK45 103 aaKnown RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 FBXO10Q9UK96 956 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 AJAP1Q9UKB5 411 aaPredicted RBP5.32□□□□□ -1.56
HDAC6-223ENST00000480525 NENFQ9UMX5 172 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 SLC27A6Q9Y2P4 619 aa5.32□□□□□ -1.56
HDAC6-223ENST00000480525 NYNRINQ9P2P1 1898 aaKnown RBP5.31□□□□□ -1.56
HDAC6-223ENST00000480525 A0A1W2PQH9 124 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 KANSL1LA0AUZ9 987 aa5.31□□□□□ -1.56
HDAC6-223ENST00000480525 C2orf78A6NCI8 922 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms