RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 C2orf15Q8WU43 125 aaKnown RBP10.89□□□□□ -0.67
LINC00173-203ENST00000480237 PIK3R5Q8WYR1 880 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 IRGQQ8WZA9 623 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 ANKRD7Q92527 254 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 SLC2A13Q96QE2 648 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 PEBP4Q96S96 227 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 TBCBQ99426 244 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 LRRC1Q9BTT6 524 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 TRIM62Q9BVG3 475 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 VN1R3Q9BXE9 311 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 SLITRK6Q9H5Y7 841 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC00173-203ENST00000480237 MTRRQ9UBK8 725 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 PCDHB12Q9Y5F1 795 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 TRANK1O15050 2925 aa10.89□□□□□ -0.67
LINC00173-203ENST00000480237 SYNJ2BP-COX16A0A087WUM0 186 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 TCRBV7S2A1N4TA0A589 114 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 RAD51CO43502 376 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 HEXIM1O94992 359 aaKnown RBP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 GJB5O95377 273 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 TFE3P19532 575 aaPredicted RBP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 MCM3P25205 808 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 HDAC4P56524 1084 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 MRPS25P82663 173 aaKnown RBP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 SMARCB1Q12824 385 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 GPR17Q13304 367 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 SLC25A52Q3SY17 297 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 MGAT5BQ3V5L5 792 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 RAB6CQ53S08 254 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 TMEM240Q5SV17 173 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 KAZNQ674X7 775 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 RSPO2Q6UXX9 243 aaPredicted RBP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 RNF168Q8IYW5 571 aaPredicted RBP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 SCML4Q8N228 414 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 FIBCD1Q8N539 461 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 TTC9BQ8N6N2 239 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 ATAD1Q8NBU5 361 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 KCTD6Q8NC69 237 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 CCDC26Q8TAB7 109 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 SCAMP5Q8TAC9 235 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 TEKT4Q8WW24 435 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 RAPGEF5Q92565 580 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 RUBCNQ92622 972 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 PNKPQ96T60 521 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 SLC9A7Q96T83 725 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 SEPT5Q99719 369 aaPredicted RBP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 LBHD1Q9BQE6 289 aaPredicted RBP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 HEMGNQ9BXL5 484 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 CALN1Q9BXU9 219 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 PARD6BQ9BYG5 372 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 RAB6CQ9H0N0 254 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 MTIF3Q9H2K0 278 aaKnown RBP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 FAM204AQ9H8W3 233 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 CHST7Q9NS84 486 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 COX16Q9P0S2 106 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 CXXC1Q9P0U4 656 aaPredicted RBP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 STIM2Q9P246 746 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 ZMYND8Q9ULU4 1186 aaPredicted RBP10.88□□□□□ -0.67
LINC00173-203ENST00000480237 SLC4A7Q9Y6M7 1214 aa10.88□□□□□ -0.67
LINC00173-203ENST00000480237 hCG_1818297A0A087WSY0 165 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 M0QYT0 321 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 FSCN2O14926 492 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 TBC1D4O60343 1298 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 TJP3O95049 919 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 EFEMP2O95967 443 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 TUBBP07437 444 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 RARAP10276 462 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 NCAM1P13591 858 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 RPL17P18621 184 aaKnown RBP10.87□□□□□ -0.67
LINC00173-203ENST00000480237 KDELR1P24390 212 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 CHRNA3P32297 505 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 CA8P35219 290 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 PTPN7P35236 360 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 GPR15P49685 360 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 EPHB4P54760 987 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 CDH6P55285 790 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 SLC7A5Q01650 507 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 ROR1Q01973 937 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 DEUP1Q05D60 604 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 SDHAF4Q5VUM1 108 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 FBXO38Q6PIJ6 1188 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 BHLHA9Q7RTU4 235 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 NUP93Q8N1F7 819 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 STKLD1Q8NE28 680 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 SLC7A14Q8TBB6 771 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 MAGOHBQ96A72 148 aaKnown RBP10.87□□□□□ -0.67
LINC00173-203ENST00000480237 C8orf48Q96LL4 319 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 RUNDC3BQ96NL0 473 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 NPY6RQ99463 290 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 HERPUD2Q9BSE4 406 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 C11orf84Q9BUA3 381 aaPredicted RBP10.87□□□□□ -0.67
LINC00173-203ENST00000480237 SNRNP25Q9BV90 132 aaKnown RBP10.87□□□□□ -0.67
LINC00173-203ENST00000480237 PLEKHA4Q9H4M7 779 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 RRN3Q9NYV6 651 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 NAALADL1Q9UQQ1 740 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 NR2E1Q9Y466 385 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 INSL6Q9Y581 213 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 BACE2Q9Y5Z0 518 aa10.87□□□□□ -0.67
LINC00173-203ENST00000480237 WDR27A2RRH5 827 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms