RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 KCNK16Q96T55 309 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 DHX33Q9H6R0 707 aaKnown RBP14.79□□□□□ -0.04
COL20A1-206ENST00000479501 PAPOLBQ9NRJ5 636 aaKnown RBP14.79□□□□□ -0.04
COL20A1-206ENST00000479501 SLC8A2Q9UPR5 921 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 CDY2AQ9Y6F7 541 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 CDY1Q9Y6F8 540 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 MAGEA13PA6NCF6 341 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 KBTBD13C9JR72 458 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 TM9SF1O15321 606 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 GFAPP14136 432 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 ETS1P14921 441 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 AMPD1P23109 780 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 MFSD10Q14728 455 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 TAF2Q6P1X5 1199 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 TINF2Q9BSI4 451 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 HAO1Q9UJM8 370 aa14.79□□□□□ -0.04
COL20A1-206ENST00000479501 FCGRTP55899 365 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 BMPR2Q13873 1038 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 CHSY1Q86X52 802 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 DEFB106AQ8N104 65 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 APOL2Q9BQE5 337 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 RNF19AQ9NV58 838 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 CTNNAL1Q9UBT7 734 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 MMP8P22894 467 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 FLT3P36888 993 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 SREBF2Q12772 1141 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 DPYSL3Q14195 570 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 KPNB1Q14974 876 aaKnown RBP14.78□□□□□ -0.04
COL20A1-206ENST00000479501 EME1Q96AY2 570 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 CASTOR2A6NHX0 329 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 C4BPAP04003 597 aaKnown RBP14.78□□□□□ -0.04
COL20A1-206ENST00000479501 KCNT2Q6UVM3 1135 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 TAS2R42Q7RTR8 314 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 RNF180Q86T96 592 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 APLFQ8IW19 511 aaPredicted RBP14.78□□□□□ -0.04
COL20A1-206ENST00000479501 NTPCRQ9BSD7 190 aaKnown RBP14.78□□□□□ -0.04
COL20A1-206ENST00000479501 ZBED2Q9BTP6 218 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 EML4Q9HC35 981 aaKnown RBP14.78□□□□□ -0.04
COL20A1-206ENST00000479501 XPNPEP1Q9NQW7 623 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 HES2Q9Y543 173 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 LOC100653049A0A140TA62 436 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 KRT34O76011 436 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 ATP6V1G2O95670 118 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 SLC2A3P11169 496 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 RBL1P28749 1068 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 ZNF143P52747 638 aaPredicted RBP14.78□□□□□ -0.04
COL20A1-206ENST00000479501 IL31Q6EBC2 164 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 PRPF39Q86UA1 669 aaKnown RBP14.78□□□□□ -0.04
COL20A1-206ENST00000479501 TCP10LQ8TDR4 215 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 DCLRE1BQ9H816 532 aa14.78□□□□□ -0.04
COL20A1-206ENST00000479501 SEC24DO94855 1032 aaPredicted RBP14.77□□□□□ -0.04
COL20A1-206ENST00000479501 ZCCHC18P0CG32 403 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 PSEN2P49810 448 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 C10orf120Q5SQS8 335 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 CMTM5Q96DZ9 223 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 DCDC2Q9UHG0 476 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 LAMB4A4D0S4 1761 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 NFKBIAP25963 317 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 NR2C2P49116 596 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 ZNF280AP59817 542 aaPredicted RBP14.77□□□□□ -0.04
COL20A1-206ENST00000479501 MAPRE2Q15555 327 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 BBS12Q6ZW61 710 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 UNC93AQ86WB7 457 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 HASPINQ8TF76 798 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 HTR3CQ8WXA8 447 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 CENPTQ96BT3 561 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 ZBTB18Q99592 522 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 GPR20Q99678 358 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 NIFKQ9BYG3 293 aaKnown RBP14.77□□□□□ -0.04
COL20A1-206ENST00000479501 ZNF214Q9UL59 606 aaPredicted RBP14.77□□□□□ -0.04
COL20A1-206ENST00000479501 C2CD2Q9Y426 696 aa14.77□□□□□ -0.04
COL20A1-206ENST00000479501 TMEM191CA6NGB0 347 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 KDM1AO60341 852 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 KPNA6O60684 536 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 BTKQ06187 659 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 POLNQ7Z5Q5 900 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 PRUNE1Q86TP1 453 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 DDIASQ8IXT1 998 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 ZSWIM2Q8NEG5 633 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 ASIC4Q96FT7 647 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 CEP41Q9BYV8 373 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 TBC1D23Q9NUY8 699 aa14.77□□□□□ -0.05
COL20A1-206ENST00000479501 AAR2Q9Y312 384 aaKnown RBP14.77□□□□□ -0.05
COL20A1-206ENST00000479501 TRPM3Q9HCF6 1732 aaPredicted RBP14.77□□□□□ -0.05
COL20A1-206ENST00000479501 NCAM2O15394 837 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 CST3P01034 146 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 PAX7P23759 505 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 CNTFP26441 200 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 HDAC4P56524 1084 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 EDEM1Q92611 657 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 ULK4Q96C45 1275 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 CACYBPQ9HB71 228 aaKnown RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 RXFP1Q9HBX9 757 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 PDGFCQ9NRA1 345 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 NRCAMQ92823 1304 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 TIMM44O43615 452 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 RPLP2P05387 115 aaKnown RBP14.76□□□□□ -0.05
COL20A1-206ENST00000479501 CCDC130P13994 396 aa14.76□□□□□ -0.05
COL20A1-206ENST00000479501 ATP6V1B1P15313 513 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms