RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 AP1G2O75843 785 aa17■□□□□ 0.31
DDX56-210ENST00000479440 CST3P01034 146 aaPredicted RBP17■□□□□ 0.31
DDX56-210ENST00000479440 ATXN1LP0C7T5 689 aaKnown RBP17■□□□□ 0.31
DDX56-210ENST00000479440 CYP4F3Q08477 520 aa17■□□□□ 0.31
DDX56-210ENST00000479440 C19orf57Q0VDD7 668 aa17■□□□□ 0.31
DDX56-210ENST00000479440 PSMD6Q15008 389 aa17■□□□□ 0.31
DDX56-210ENST00000479440 SNRNP35Q16560 246 aaKnown RBP17■□□□□ 0.31
DDX56-210ENST00000479440 HLA-BQ31612 363 aa17■□□□□ 0.31
DDX56-210ENST00000479440 ADAM32Q8TC27 787 aa17■□□□□ 0.31
DDX56-210ENST00000479440 RHBDD1Q8TEB9 315 aa17■□□□□ 0.31
DDX56-210ENST00000479440 TMX3Q96JJ7 454 aa17■□□□□ 0.31
DDX56-210ENST00000479440 ITM2CQ9NQX7 267 aa17■□□□□ 0.31
DDX56-210ENST00000479440 GOLGA8CPA6NN73 597 aa16.99■□□□□ 0.31
DDX56-210ENST00000479440 E9PAM4 449 aa16.99■□□□□ 0.31
DDX56-210ENST00000479440 SYNCRIPO60506 623 aaKnown RBP16.99■□□□□ 0.31
DDX56-210ENST00000479440 GREM1O60565 184 aa16.99■□□□□ 0.31
DDX56-210ENST00000479440 NEFLP07196 543 aa16.99■□□□□ 0.31
DDX56-210ENST00000479440 ACADMP11310 421 aa16.99■□□□□ 0.31
DDX56-210ENST00000479440 ATP5C1P36542 298 aaKnown RBP16.99■□□□□ 0.31
DDX56-210ENST00000479440 RABEP1Q15276 862 aa16.99■□□□□ 0.31
DDX56-210ENST00000479440 LARP1BQ659C4 914 aaKnown RBP16.99■□□□□ 0.31
DDX56-210ENST00000479440 PDCD7Q8N8D1 485 aaKnown RBP16.99■□□□□ 0.31
DDX56-210ENST00000479440 UCMAQ8WVF2 138 aa16.99■□□□□ 0.31
DDX56-210ENST00000479440 PRCCQ92733 491 aaPredicted RBP16.99■□□□□ 0.31
DDX56-210ENST00000479440 SIPA1Q96FS4 1042 aa16.99■□□□□ 0.31
DDX56-210ENST00000479440 KLF16Q9BXK1 252 aaPredicted RBP16.99■□□□□ 0.31
DDX56-210ENST00000479440 PCED1AQ9H1Q7 454 aa16.99■□□□□ 0.31
DDX56-210ENST00000479440 FBXO2Q9UK22 296 aaPredicted RBP16.99■□□□□ 0.31
DDX56-210ENST00000479440 SRPRBQ9Y5M8 271 aaKnown RBP16.99■□□□□ 0.31
DDX56-210ENST00000479440 PTPRBP23467 1997 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 TRABD2BA6NFA1 517 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 METTL12A8MUP2 240 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 WASH3PC4AMC7 463 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 EIF3DO15371 548 aaKnown RBP eCLIP16.98■□□□□ 0.31
DDX56-210ENST00000479440 ZIC2O95409 532 aaPredicted RBP16.98■□□□□ 0.31
DDX56-210ENST00000479440 CISD3P0C7P0 127 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 TPMTP51580 245 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 CYP24A1Q07973 514 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 INAVAQ3KP66 663 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 DBX2Q6ZNG2 339 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 RDH13Q8NBN7 331 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 BHMTQ93088 406 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 NUP58Q9BVL2 599 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 TRIM9Q9C026 710 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 MKRN2Q9H000 416 aaKnown RBP16.98■□□□□ 0.31
DDX56-210ENST00000479440 SMYD3Q9H7B4 428 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 CYLDQ9NQC7 956 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 SLC27A6Q9Y2P4 619 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.98■□□□□ 0.31
DDX56-210ENST00000479440 GON4LQ3T8J9 2241 aa16.98■□□□□ 0.31
DDX56-210ENST00000479440 KCNJ18B7U540 433 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 TNFSF14O43557 240 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 PHACTR2O75167 634 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 IGLV3-19P01714 112 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 TRIM21P19474 475 aaKnown RBP16.97■□□□□ 0.31
DDX56-210ENST00000479440 IL12RB1P42701 662 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 GRK6P43250 576 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 AFF3P51826 1226 aaKnown RBP16.97■□□□□ 0.31
DDX56-210ENST00000479440 CDH8P55286 799 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 MYL6P60660 151 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 TEAD4Q15561 434 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 ZNF699Q32M78 642 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 SCARA5Q6ZMJ2 495 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 SNX19Q92543 992 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 CCDC127Q96BQ5 260 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 XYLT2Q9H1B5 865 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 VRTNQ9H8Y1 702 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
DDX56-210ENST00000479440 THAP10Q9P2Z0 257 aaPredicted RBP16.97■□□□□ 0.31
DDX56-210ENST00000479440 EIF2B4Q9UI10 523 aaKnown RBP16.97■□□□□ 0.31
DDX56-210ENST00000479440 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.97■□□□□ 0.31
DDX56-210ENST00000479440 MYO18AQ92614 2054 aaKnown RBP16.97■□□□□ 0.31
DDX56-210ENST00000479440 A0A1B0GVT2 93 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 TK2O00142 265 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 TBX18O95935 607 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 CCT8P50990 548 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 BNC1Q01954 994 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 CAMK2BQ13554 666 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 ENPP2Q13822 863 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 EIF4HQ15056 248 aaKnown RBP16.96■□□□□ 0.31
DDX56-210ENST00000479440 SMAD1Q15797 465 aaKnown RBP16.96■□□□□ 0.31
DDX56-210ENST00000479440 ZNF667Q5HYK9 610 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 KLHDC10Q6PID8 442 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 Q6ZNB5 142 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 PAQR9Q6ZVX9 377 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 TADA2BQ86TJ2 420 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 TMPRSS6Q8IU80 811 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 FUKQ8N0W3 1084 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 XXYLT1Q8NBI6 393 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 NXPE2Q96DL1 559 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 DCBLD2Q96PD2 775 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 LRRC27Q9C0I9 530 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 CSNK1G1Q9HCP0 422 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 PLK2Q9NYY3 685 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 FBXO10Q9UK96 956 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 BTBD3Q9Y2F9 522 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 ZNF510Q9Y2H8 683 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 CLIC4Q9Y696 253 aa16.96■□□□□ 0.31
DDX56-210ENST00000479440 UBE4BO95155 1302 aa16.96■□□□□ 0.3
DDX56-210ENST00000479440 IGSF10Q6WRI0 2623 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms