RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 TERB1Q8NA31 727 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 NGDNQ8NEJ9 315 aaKnown RBP6.33□□□□□ -1.4
CCDC58-204ENST00000479414 STYXQ8WUJ0 223 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 DAZAP1Q96EP5 407 aaKnown RBP6.33□□□□□ -1.4
CCDC58-204ENST00000479414 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 CIPCQ9C0C6 399 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 MGAT4CQ9UBM8 478 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 SCAF8Q9UPN6 1271 aaKnown RBP6.33□□□□□ -1.4
CCDC58-204ENST00000479414 DTNAQ9Y4J8 743 aa6.33□□□□□ -1.4
CCDC58-204ENST00000479414 AOX1Q06278 1338 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 SPATA31A6Q5VVP1 1343 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 H7C1Q1 480 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 PIP5K1BO14986 540 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 NPC1O15118 1278 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 FFAR2O15552 330 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 TNFRSF6BO95407 300 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 VIPP01282 170 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 ADRA1DP25100 572 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 LMAN2Q12907 356 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 FCRLBQ6BAA4 426 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 SUMO4Q6EEV6 95 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 LINC01465Q8N7H1 131 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.32□□□□□ -1.4
CCDC58-204ENST00000479414 PNPLA1Q8N8W4 532 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 ZNF527Q8NB42 609 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 VPS50Q96JG6 964 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 NUDT22Q9BRQ3 303 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 PPCSQ9HAB8 311 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 SH3BP4Q9P0V3 963 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 LPAR3Q9UBY5 353 aa6.32□□□□□ -1.4
CCDC58-204ENST00000479414 MAGED2Q9UNF1 606 aaPredicted RBP6.32□□□□□ -1.4
CCDC58-204ENST00000479414 GOLGA6L3A6NEY3 463 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 PCDH17O14917 1159 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 DHHO43323 396 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 PIP5K1CO60331 668 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 GLP2RO95838 553 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 CHKAP35790 457 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 DGKQP52824 942 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 PROK1P58294 105 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 DEUP1Q05D60 604 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 KRT72Q14CN4 511 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 ELF2Q15723 593 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 PFKFB4Q16877 469 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 AASDHQ4L235 1098 aaPredicted RBP6.31□□□□□ -1.4
CCDC58-204ENST00000479414 TMEM63BQ5T3F8 832 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 LIN54Q6MZP7 749 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 TLDC1Q6P9B6 456 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 BCDIN3DQ7Z5W3 292 aaKnown RBP6.31□□□□□ -1.4
CCDC58-204ENST00000479414 OR1N1Q8NGS0 311 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 MORC4Q8TE76 937 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 GRAMD1AQ96CP6 724 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 MMS19Q96T76 1030 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 PSMD1Q99460 953 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 RXFP3Q9NSD7 469 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 GAR1Q9NY12 217 aaKnown RBP6.31□□□□□ -1.4
CCDC58-204ENST00000479414 ASIC5Q9NY37 505 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 GRHPRQ9UBQ7 328 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 ASAP1Q9ULH1 1129 aa6.31□□□□□ -1.4
CCDC58-204ENST00000479414 ARID4BQ4LE39 1312 aaPredicted RBP6.3□□□□□ -1.4
CCDC58-204ENST00000479414 TRIM38O00635 465 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 ZSCAN9O15535 394 aaPredicted RBP6.3□□□□□ -1.4
CCDC58-204ENST00000479414 EXOC3O60645 756 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 APEHP13798 732 aaKnown RBP6.3□□□□□ -1.4
CCDC58-204ENST00000479414 PBX1P40424 430 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 RENBPP51606 427 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 NANOS3P60323 173 aaKnown RBP6.3□□□□□ -1.4
CCDC58-204ENST00000479414 KCNJ12Q14500 433 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 GRHL2Q6ISB3 625 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 MYLK4Q86YV6 388 aaPredicted RBP6.3□□□□□ -1.4
CCDC58-204ENST00000479414 DNAJC10Q8IXB1 793 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 EXOC8Q8IYI6 725 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 ATG16L2Q8NAA4 619 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 FSCN3Q9NQT6 498 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 HELLSQ9NRZ9 838 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 TFCP2L1Q9NZI6 479 aa6.3□□□□□ -1.4
CCDC58-204ENST00000479414 SUV39H1O43463 412 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 ASNA1O43681 348 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 NTSR2O95665 410 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 C1RP00736 705 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
CCDC58-204ENST00000479414 GRM1Q13255 1194 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 DNASE1L3Q13609 305 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 SPARCL1Q14515 664 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 FAM90A2PQ658T7 463 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 PGBD2Q6P3X8 592 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 RASGRP3Q8IV61 690 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 CLASRPQ8N2M8 674 aaKnown RBP6.29□□□□□ -1.4
CCDC58-204ENST00000479414 HASPINQ8TF76 798 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 EDC3Q96F86 508 aaKnown RBP6.29□□□□□ -1.4
CCDC58-204ENST00000479414 CRAMP1Q96RY5 1269 aa6.29□□□□□ -1.4
CCDC58-204ENST00000479414 TCRBV5S1A1TA0A578 114 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 ACKR2O00590 384 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 MT-CO3P00414 261 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 CSTBP04080 98 aaKnown RBP6.28□□□□□ -1.4
CCDC58-204ENST00000479414 SRGAP2BP0DMP2 458 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 NPPBP16860 134 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 TXNL4AP83876 142 aaKnown RBP6.28□□□□□ -1.4
CCDC58-204ENST00000479414 CFHR3Q02985 330 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 TFF2Q03403 129 aa6.28□□□□□ -1.4
CCDC58-204ENST00000479414 ICA1Q05084 483 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms