RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 STC2O76061 302 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 EGFP01133 1207 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 HMBSP08397 361 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 OPRD1P41143 372 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 RPL34P49207 117 aaKnown RBP16.33■□□□□ 0.2
HMGA1-206ENST00000478214 GRSF1Q12849 480 aaKnown RBP eCLIP16.33■□□□□ 0.2
HMGA1-206ENST00000478214 SMYD5Q6GMV2 418 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 APTXQ7Z2E3 356 aaKnown RBP16.33■□□□□ 0.2
HMGA1-206ENST00000478214 PASD1Q8IV76 773 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 DHX40Q8IX18 779 aaKnown RBP16.33■□□□□ 0.2
HMGA1-206ENST00000478214 IRGQQ8WZA9 623 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 CD101Q93033 1021 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 PHOX2BQ99453 314 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 SLC4A5Q9BY07 1137 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 GANQ9H2C0 597 aa16.33■□□□□ 0.2
HMGA1-206ENST00000478214 FAM207AQ9NSI2 230 aaPredicted RBP16.33■□□□□ 0.2
HMGA1-206ENST00000478214 LSM7Q9UK45 103 aaKnown RBP16.33■□□□□ 0.2
HMGA1-206ENST00000478214 SLC12A8A0AV02 714 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 LGALS16A8MUM7 142 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 FBXO21O94952 628 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 ADH1CP00326 375 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 KLKB1P03952 638 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 DMDP11532 3685 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 ADH5P11766 374 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 PTMSP20962 102 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 ZNF165P49910 485 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 COG7P83436 770 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 SYCP1Q15431 976 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 Q6ZNB5 142 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 TMEM25Q86YD3 366 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 SCUBE3Q8IX30 993 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 WDTC1Q8N5D0 677 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 STK32AQ8WU08 396 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 RNF139Q8WU17 664 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 STK33Q9BYT3 514 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 ABCC13Q9NSE7 274 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 OLA1Q9NTK5 396 aaKnown RBP16.32■□□□□ 0.2
HMGA1-206ENST00000478214 STRIP2Q9ULQ0 834 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 PCDHGC3Q9UN70 934 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 SIK3Q9Y2K2 1263 aa16.32■□□□□ 0.2
HMGA1-206ENST00000478214 SMTNL1A8MU46 457 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 E5RJQ4 531 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 EPHB6O15197 1021 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 LTFP02788 710 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 SP9P0CG40 484 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 DRD1P21728 446 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 ACADSBP45954 432 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 SLC6A11P48066 632 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 UBXN1Q04323 297 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 CSTF1Q05048 431 aaKnown RBP16.31■□□□□ 0.2
HMGA1-206ENST00000478214 PDCLQ13371 301 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 TMEM110Q86TL2 294 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 C12orf40Q86WS4 652 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 FMNL3Q8IVF7 1028 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 SYNPOQ8N3V7 929 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 SPEM1Q8N4L4 309 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 EZH1Q92800 747 aaPredicted RBP16.31■□□□□ 0.2
HMGA1-206ENST00000478214 EXOC4Q96A65 974 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 IER2Q9BTL4 223 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 SPHK2Q9NRA0 654 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 TJP2Q9UDY2 1190 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 SFMBT1Q9UHJ3 866 aa16.31■□□□□ 0.2
HMGA1-206ENST00000478214 F8VZ95 297 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 PAPSS1O43252 624 aaPredicted RBP16.3■□□□□ 0.2
HMGA1-206ENST00000478214 CYP11B1P15538 503 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 CORO1AP31146 461 aaKnown RBP16.3■□□□□ 0.2
HMGA1-206ENST00000478214 KRT9P35527 623 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 BPIFB4P59827 614 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 POLR2FP61218 127 aaKnown RBP16.3■□□□□ 0.2
HMGA1-206ENST00000478214 SATB1Q01826 763 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 GAD2Q05329 585 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 MESP2Q0VG99 397 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 IQCB1Q15051 598 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 ANO4Q32M45 955 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 PKN3Q6P5Z2 889 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 TSSK4Q6SA08 328 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 MAMSTRQ6ZN01 415 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 NAT16Q8N8M0 369 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
HMGA1-206ENST00000478214 LHX5Q9H2C1 402 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 NLRC4Q9NPP4 1024 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 PRMT8Q9NR22 394 aaPredicted RBP16.3■□□□□ 0.2
HMGA1-206ENST00000478214 C2orf42Q9NWW7 574 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 FBXO4Q9UKT5 387 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 MYO15AQ9UKN7 3530 aa16.3■□□□□ 0.2
HMGA1-206ENST00000478214 HOXC11O43248 304 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-206ENST00000478214 SART1O43290 800 aaKnown RBP16.29■□□□□ 0.2
HMGA1-206ENST00000478214 MSI1O43347 362 aaKnown RBP16.29■□□□□ 0.2
HMGA1-206ENST00000478214 RNF40O75150 1001 aa16.29■□□□□ 0.2
HMGA1-206ENST00000478214 FYNP06241 537 aa16.29■□□□□ 0.2
HMGA1-206ENST00000478214 CXCL12P48061 93 aa16.29■□□□□ 0.2
HMGA1-206ENST00000478214 TRIP4Q15650 581 aaPredicted RBP16.29■□□□□ 0.2
HMGA1-206ENST00000478214 TAF3Q5VWG9 929 aa16.29■□□□□ 0.2
HMGA1-206ENST00000478214 MSANTD2Q6P1R3 559 aa16.29■□□□□ 0.2
HMGA1-206ENST00000478214 TPGS1Q6ZTW0 290 aa16.29■□□□□ 0.2
HMGA1-206ENST00000478214 DENND1CQ8IV53 801 aa16.29■□□□□ 0.2
HMGA1-206ENST00000478214 C1orf131Q8NDD1 294 aaKnown RBP16.29■□□□□ 0.2
HMGA1-206ENST00000478214 GOLGA1Q92805 767 aa16.29■□□□□ 0.2
HMGA1-206ENST00000478214 FAM149B1Q96BN6 582 aa16.29■□□□□ 0.2
HMGA1-206ENST00000478214 PLD4Q96BZ4 506 aa16.29■□□□□ 0.2
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