RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 GUCD1Q96NT3 240 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 SERPINB12Q96P63 405 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 WRNIP1Q96S55 665 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 SELENOSQ9BQE4 189 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 PI4K2AQ9BTU6 479 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 DCLK3Q9C098 648 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 NSRP1Q9H0G5 558 aaKnown RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 CDC42EP4Q9H3Q1 356 aaKnown RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 SEMA4AQ9H3S1 761 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 AZI2Q9H6S1 392 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ACP6Q9NPH0 428 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 NRBP2Q9NSY0 501 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 TMEM51Q9NW97 253 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 RBAKQ9NYW8 714 aaPredicted RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 GPRC5DQ9NZD1 345 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ADAM22Q9P0K1 906 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 FAM8A1Q9UBU6 413 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 FBXO40Q9UH90 709 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 ASIC3Q9UHC3 531 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 CHORDC1Q9UHD1 332 aaPredicted RBP5.21□□□□□ -1.58
SF3B6-202ENST00000478050 IP6K2Q9UHH9 426 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 PCDHB4Q9Y5E5 795 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 CAPN7Q9Y6W3 813 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 RALGAPA2Q2PPJ7 1873 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 PLXNA1Q9UIW2 1896 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 UMODL1Q5DID0 1318 aa5.21□□□□□ -1.58
SF3B6-202ENST00000478050 KAT6AQ92794 2004 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 BRCA2P51587 3418 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 IGKV6D-21A0A0A0MT36 114 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 A0A0B4J269 797 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 TLDC2A0PJX2 215 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 FAM170AA1A519 330 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 LRRIQ4A6NIV6 560 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 METTL12A8MUP2 240 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 DCDC2CA8MYV0 355 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 H0YHG0 523 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 GIPC1O14908 333 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 ASAP2O43150 1006 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 TCEA3O75764 348 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 VNN1O95497 513 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 LSM8O95777 96 aaKnown RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CALB1P05937 261 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CTSBP07858 339 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CHN1P15882 459 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 FGFR4P22455 802 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 BMP8BP34820 402 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 BUD31P41223 144 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 KCNJ1P48048 391 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 ALDH5A1P51649 535 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 ZNF132P52740 706 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 EFNA5P52803 228 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 YWHAEP62258 255 aaKnown RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 NOP14P78316 857 aaKnown RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 SP4Q02446 784 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 TAP1Q03518 808 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 MCL1Q07820 350 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 ACTN3Q08043 901 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 IFT88Q13099 833 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CDK5R2Q13319 367 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 KLF1Q13351 362 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 AUHQ13825 339 aaKnown RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 NEDD9Q14511 834 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 ITIH4Q14624 930 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 TARBP2Q15633 366 aaKnown RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CCNG2Q16589 344 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 ZNF568Q3ZCX4 644 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 LACTB2Q53H82 288 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 RNF187Q5TA31 235 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 LMBRD2Q68DH5 695 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 FAM109BQ6ICB4 259 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CRELD2Q6UXH1 353 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 MMS22LQ6ZRQ5 1243 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CCDC25Q86WR0 208 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CPNE8Q86YQ8 564 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 RIOX2Q8IUF8 465 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CILP2Q8IUL8 1156 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 RELL1Q8IUW5 271 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 WDR49Q8IV35 697 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CCDC50Q8IVM0 306 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 SUGP1Q8IWZ8 645 aaKnown RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 EXOC8Q8IYI6 725 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 RIBC1Q8N443 379 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 UBR7Q8N806 425 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CCDC89Q8N998 374 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 RBBP8NLQ8NC74 664 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CCDC197Q8NCU1 140 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 FEZF2Q8TBJ5 459 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 C1orf54Q8WWF1 131 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 ATXN2LQ8WWM7 1075 aaKnown RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 TCP11Q8WWU5 503 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CPA5Q8WXQ8 436 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 ZKSCAN4Q969J2 545 aaPredicted RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 TMEM143Q96AN5 459 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 RBM41Q96IZ5 413 aaKnown RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CABS1Q96KC9 395 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 CCDC114Q96M63 670 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 SCLT1Q96NL6 688 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 MPHOSPH6Q99547 160 aaKnown RBP5.2□□□□□ -1.58
SF3B6-202ENST00000478050 C11orf70Q9BRQ4 267 aa5.2□□□□□ -1.58
SF3B6-202ENST00000478050 MSTO1Q9BUK6 570 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms