RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 TPK1Q9H3S4 243 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 RSAD1Q9HA92 442 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 POLMQ9NP87 494 aaPredicted RBP6.17□□□□□ -1.42
TRA2B-211ENST00000477939 FARSBQ9NSD9 589 aaKnown RBP6.17□□□□□ -1.42
TRA2B-211ENST00000477939 FAM86C1Q9NVL1 165 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 DZANK1Q9NVP4 752 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 ARMC1Q9NVT9 282 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 MARCH5Q9NX47 278 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 TRIM10Q9UDY6 481 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 PFDN2Q9UHV9 154 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 VANGL2Q9ULK5 521 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 PYCARDQ9ULZ3 195 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 SORCS3Q9UPU3 1222 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 NR2E1Q9Y466 385 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 GPC6Q9Y625 555 aaPredicted RBP6.17□□□□□ -1.42
TRA2B-211ENST00000477939 PHLPP2Q6ZVD8 1323 aa6.17□□□□□ -1.42
TRA2B-211ENST00000477939 WDR87Q6ZQQ6 2873 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 FAM186AA6NE01 2351 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 GVINP1Q7Z2Y8 2422 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 KRBA1A5PL33 1030 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 CARNS1A5YM72 827 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 SNTNA6NMZ2 147 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 K7ELQ4 463 aaPredicted RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 NRP1O14786 923 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 HGSO14964 777 aaPredicted RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 INPPL1O15357 1258 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 GAS2O43903 313 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 ST18O60284 1047 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 DKC1O60832 514 aaKnown RBP eCLIP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 FKBP9O95302 570 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 CD2BP2O95400 341 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 EFEMP2O95967 443 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 POMCP01189 267 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 SSBP05455 408 aaKnown RBP eCLIP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 CNPP09543 421 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 ALOX5P09917 674 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 UBTFL6P0CB48 400 aaPredicted RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 VCLP18206 1134 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 CFL1P23528 166 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 TKTP29401 623 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 AVPR2P30518 371 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 HSPA13P48723 471 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 AK2P54819 239 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 PLTPP55058 493 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 GSDMDP57764 484 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 GBE1Q04446 702 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 DSC1Q08554 894 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 ST3GAL1Q11201 340 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 CAPSQ13938 189 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 GIT2Q14161 759 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 EPHA7Q15375 998 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 AMHR2Q16671 573 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 ME3Q16798 604 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 ZCWPW2Q504Y3 356 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 XKR9Q5GH70 373 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 SIGIRRQ6IA17 410 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 RHOUQ7L0Q8 258 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 STK32CQ86UX6 486 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 ZNF354CQ86Y25 554 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 HACE1Q8IYU2 909 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 ZDHHC14Q8IZN3 488 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 CCDC63Q8NA47 563 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 TDRD5Q8NAT2 981 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 URGCPQ8TCY9 931 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 ASAP3Q8TDY4 903 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 NOC3LQ8WTT2 800 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 RMDN1Q96DB5 314 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 RBM18Q96H35 190 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 CPB2Q96IY4 423 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 HIC2Q96JB3 615 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 RIPOR3Q96MK2 946 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 ZFP42Q96MM3 310 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 KLHL5Q96PQ7 755 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 SECISBP2Q96T21 854 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 MNTQ99583 582 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 PRRX2Q99811 253 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 EIF2AK1Q9BQI3 630 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 GPATCH1Q9BRR8 931 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 TMEM175Q9BSA9 504 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 DESI2Q9BSY9 194 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 SHCBP1LQ9BZQ2 653 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 EDEM3Q9BZQ6 932 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 GBA3Q9H227 469 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 RNF39Q9H2S5 420 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 NXF3Q9H4D5 531 aaKnown RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 SFXN1Q9H9B4 322 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 ATP13A1Q9HD20 1204 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 SLC40A1Q9NP59 571 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 CCDC177Q9NQR7 707 aaPredicted RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 PARP2Q9UGN5 583 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 TEKT2Q9UIF3 430 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 HES2Q9Y543 173 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 IPPQ9Y573 584 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 MAGED1Q9Y5V3 778 aaPredicted RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 SNX9Q9Y5X1 595 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 CNTNAP2Q9UHC6 1331 aa6.16□□□□□ -1.42
TRA2B-211ENST00000477939 PTPRZ1P23471 2315 aaPredicted RBP6.16□□□□□ -1.42
TRA2B-211ENST00000477939 SPTBN4Q9H254 2564 aa6.15□□□□□ -1.42
TRA2B-211ENST00000477939 VWA8A3KMH1 1905 aa6.15□□□□□ -1.42
TRA2B-211ENST00000477939 MTCL1Q9Y4B5 1905 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms