RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MAPK6Q16659 721 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 TRIM16LQ309B1 348 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 AGAP7PQ5VUJ5 663 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 ZDHHC24Q6UX98 284 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 IDO2Q6ZQW0 420 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 GALNT7Q86SF2 657 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 ANKRD35Q8N283 1001 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 GSDMBQ8TAX9 411 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 SYN2Q92777 582 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 KLRG1Q96E93 195 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 RIT2Q99578 217 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 TEKT3Q9BXF9 490 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 CALN1Q9BXU9 219 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 MRPL9Q9BYD2 267 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 OSBPL8Q9BZF1 889 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 KLHL25Q9H0H3 589 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 SEMA6BQ9H3T3 888 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 DCAF16Q9NXF7 216 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 TBC1D14Q9P2M4 693 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 ILVBLA1L0T0 632 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 H0YC42 278 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 VWA5AO00534 786 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 NFIBO00712 420 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 TXNDC9O14530 226 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 C8BP07358 591 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 RBP3P10745 1247 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 TBXAS1P24557 533 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 KLRC1P26715 233 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 OAZ1P54368 228 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 TPD52P55327 224 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 POLR2FP61218 127 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 UBXN2AP68543 259 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 HP1BP3Q5SSJ5 553 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 NOL9Q5SY16 702 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 GPR141Q7Z602 305 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 ADAMTS16Q8TE57 1224 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 TTC9Q92623 222 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 HPS1Q92902 700 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 TTC25Q96NG3 672 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 PANX3Q96QZ0 392 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 COQ7Q99807 217 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 ADARB2Q9NS39 739 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 ARL8BQ9NVJ2 186 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 ANKMY1Q9P2S6 941 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 LGALS13Q9UHV8 139 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 PACSIN2Q9UNF0 486 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
RTFDC1-207ENST00000477573 MTA2O94776 668 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 ATP6V1B1P15313 513 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 PRKCAP17252 672 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 PRKACAP17612 351 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 CXCR2P25025 360 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 PMLP29590 882 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 CLK1P49759 484 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 PLTPP55058 493 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 PDK4Q16654 411 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 DNAL1Q4LDG9 190 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 C10orf76Q5T2E6 689 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 PRAMEF18Q5VWM3 479 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 LILRB2Q8N423 598 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 CYTH2Q99418 400 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 HSD17B14Q9BPX1 270 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 NOC4LQ9BVI4 516 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 MLXIPLQ9NP71 852 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 HOMER2Q9NSB8 354 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 POU2F3Q9UKI9 436 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 VANGL2Q9ULK5 521 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 PCDHGB3Q9Y5G1 929 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 SBF1O95248 1867 aa13.09□□□□□ -0.31
RTFDC1-207ENST00000477573 FAM47DPA6NHR8 397 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 GPC4O75487 556 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 FAM58BPP0C7Q3 252 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 KLK7P49862 253 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 HMGCS2P54868 508 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 TAGLNQ01995 201 aaKnown RBP13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 OXA1LQ15070 435 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 TLR1Q15399 786 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 CYP2A13Q16696 494 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 ZNF568Q3ZCX4 644 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 FAM122CQ6P4D5 195 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 NLRX1Q86UT6 975 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 REM2Q8IYK8 340 aaPredicted RBP13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 METTL13Q8N6R0 699 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 FBXO25Q8TCJ0 367 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 GDPD5Q8WTR4 605 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 JADE3Q92613 823 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 LBHD1Q9BQE6 289 aaPredicted RBP13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 TRIM51Q9BSJ1 452 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 C17orf80Q9BSJ5 609 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 ZBED2Q9BTP6 218 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 MROQ9BYG7 248 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 CELF4Q9BZC1 486 aaKnown RBP13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 ZHX3Q9H4I2 956 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 DNAJC12Q9UKB3 198 aa13.08□□□□□ -0.31
RTFDC1-207ENST00000477573 RBBP6Q7Z6E9 1792 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-207ENST00000477573 PFASO15067 1338 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms