RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 RPGRQ92834 1020 aaKnown RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 MPP4Q96JB8 637 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 OLFM1Q99784 485 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PRMT1Q99873 361 aaKnown RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 ECSITQ9BQ95 431 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 BTBD10Q9BSF8 475 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TUBGCP2Q9BSJ2 902 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 HAUS8Q9BT25 410 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 MENTQ9BUN1 341 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PLA2G12BQ9BX93 195 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 OSBPL10Q9BXB5 764 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 MRPS26Q9BYN8 205 aaKnown RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PITPNM3Q9BZ71 974 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 IMPG2Q9BZV3 1241 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 DHX36Q9H2U1 1008 aaKnown RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PFDN4Q9NQP4 134 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TBC1D23Q9NUY8 699 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TAB2Q9NYJ8 693 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 NKX1-2Q9UD57 310 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 PNMA2Q9UL42 364 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 FAF1Q9UNN5 650 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-212ENST00000477520 TELO2Q9Y4R8 837 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 SNX9Q9Y5X1 595 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 SQORQ9Y6N5 450 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 RIC1Q4ADV7 1423 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 COL24A1Q17RW2 1714 aa4.94□□□□□ -1.62
PTCD3-212ENST00000477520 BTBD18B2RXH4 712 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 TCP11X1B4DZS4 312 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 KIF28PB7ZC32 967 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 H0YIN7 160 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 DDX3XO00571 662 aaKnown RBP eCLIP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 CAPN9O14815 690 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 SLC22A1O15245 554 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 TBCAO75347 108 aaKnown RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 CIB2O75838 187 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 KRT6AP02538 564 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 MMP1P03956 469 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 KRT6BP04259 564 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 CYBBP04839 570 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 C6P13671 934 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 KCNA2P16389 499 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 IFNAR1P17181 557 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 STX2P32856 288 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 EPS15P42566 896 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 HSPA13P48723 471 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 METAP2P50579 478 aaKnown RBP eCLIP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 CHN2P52757 468 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 NR1H2P55055 460 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 CSE1LP55060 971 aaKnown RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 GJA9P57773 515 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 TGFB2P61812 414 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 PRR5P85299 388 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 PPIDQ08752 370 aaKnown RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 IFIT5Q13325 482 aaKnown RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 TNIP1Q15025 636 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 SF3B3Q15393 1217 aaKnown RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 SEPT7Q16181 437 aaKnown RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 ASTE1Q2TB18 679 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 P3H1Q32P28 736 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 FAAH2Q6GMR7 532 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 PRR5LQ6MZQ0 368 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 CENPUQ71F23 418 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 SGMS1Q86VZ5 419 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 RHOT2Q8IXI1 618 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 JADE3Q92613 823 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 ANKS1AQ92625 1134 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 BORCS5Q969J3 196 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 ABTB1Q969K4 478 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 EME1Q96AY2 570 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 NACC2Q96BF6 587 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 EAF2Q96CJ1 260 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 FNBP1Q96RU3 617 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 NACAP1Q9BZK3 213 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 TANGO6Q9C0B7 1094 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 PDGFDQ9GZP0 370 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 ZCWPW1Q9H0M4 648 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 BOLA2Q9H3K6 86 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 DENND2DQ9H6A0 471 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 PARVGQ9HBI0 331 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 MOV10Q9HCE1 1003 aaKnown RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 COPRSQ9NQ92 184 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 ATAD3AQ9NVI7 634 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 GID8Q9NWU2 228 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 TBC1D7Q9P0N9 293 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 HDAC9Q9UKV0 1011 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 MTUS1Q9ULD2 1270 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 SCAF8Q9UPN6 1271 aaKnown RBP4.93□□□□□ -1.62
PTCD3-212ENST00000477520 B3GNT3Q9Y2A9 372 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 GIT1Q9Y2X7 761 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 TSC22D4Q9Y3Q8 395 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 CD2APQ9Y5K6 639 aa4.93□□□□□ -1.62
PTCD3-212ENST00000477520 ZNF609O15014 1411 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 KLRG2A4D1S0 409 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TBKBP1A7MCY6 615 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 KRIT1O00522 736 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 KMOO15229 486 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 TLR3O15455 904 aaKnown RBP4.92□□□□□ -1.62
PTCD3-212ENST00000477520 GYG2O15488 501 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 OPHN1O60890 802 aa4.92□□□□□ -1.62
PTCD3-212ENST00000477520 DNAJC6O75061 913 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms