RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SRGAP2O75044 1071 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 TUSC2O75896 110 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 CEP152O94986 1710 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 MT-CO3P00414 261 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 FGBP02675 491 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 HRGP04196 525 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 A1BGP04217 495 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 PRF1P14222 555 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 CREB1P16220 341 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 TKTP29401 623 aaKnown RBP4.93□□□□□ -1.62
UBR3-209ENST00000477461 SLC7A1P30825 629 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 SUMO2P61956 95 aaKnown RBP4.93□□□□□ -1.62
UBR3-209ENST00000477461 TRIM71Q2Q1W2 868 aaKnown RBP4.93□□□□□ -1.62
UBR3-209ENST00000477461 CERCAMQ5T4B2 595 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 MEX3CQ5U5Q3 659 aaKnown RBP4.93□□□□□ -1.62
UBR3-209ENST00000477461 RUSC1-AS1Q66K80 236 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 TMEM65Q6PI78 240 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 ZNF517Q6ZMY9 492 aaPredicted RBP4.93□□□□□ -1.62
UBR3-209ENST00000477461 KRT73Q86Y46 540 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 SFTPA1Q8IWL2 248 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 OR56A3Q8NH54 315 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 C16orf52Q8NHV5 167 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 TTC8Q8TAM2 541 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 OSR1Q8TAX0 266 aaPredicted RBP4.93□□□□□ -1.62
UBR3-209ENST00000477461 FOXP1Q9H334 677 aaPredicted RBP4.93□□□□□ -1.62
UBR3-209ENST00000477461 ATP6V0A4Q9HBG4 840 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 SACM1LQ9NTJ5 587 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 TMEM184CQ9NVA4 438 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 GEMIN8Q9NWZ8 242 aaKnown RBP4.93□□□□□ -1.62
UBR3-209ENST00000477461 NOB1Q9ULX3 412 aaKnown RBP4.93□□□□□ -1.62
UBR3-209ENST00000477461 DEPDC5O75140 1603 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 IQGAP3Q86VI3 1631 aa4.93□□□□□ -1.62
UBR3-209ENST00000477461 ZC3H13Q5T200 1668 aaKnown RBP4.92□□□□□ -1.62
UBR3-209ENST00000477461 PRDM15P57071 1507 aaPredicted RBP4.92□□□□□ -1.62
UBR3-209ENST00000477461 KDM5DQ9BY66 1539 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 FAM135AQ9P2D6 1515 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 CFAP65Q6ZU64 1925 aaKnown RBP4.92□□□□□ -1.62
UBR3-209ENST00000477461 MYMKA6NI61 221 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 H7C4K7 107 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 DIO1P49895 249 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 RAB32Q13637 225 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 LAMB3Q13751 1172 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 HLTFQ14527 1009 aaKnown RBP eCLIP4.92□□□□□ -1.62
UBR3-209ENST00000477461 ANO6Q4KMQ2 910 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 NPNTQ6UXI9 565 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 PTCHD4Q6ZW05 846 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 CHST15Q7LFX5 561 aaPredicted RBP4.92□□□□□ -1.62
UBR3-209ENST00000477461 SRGAP1Q7Z6B7 1085 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 MRPL10Q7Z7H8 261 aaKnown RBP4.92□□□□□ -1.62
UBR3-209ENST00000477461 CUL5Q93034 780 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 RSPRY1Q96DX4 576 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 KRTAP1-5Q9BYS1 174 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 EBF3Q9H4W6 596 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 PRDM11Q9NQV5 511 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 CPNE7Q9UBL6 633 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 MGAT4CQ9UBM8 478 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 TET3O43151 1660 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 SIGLEC1Q9BZZ2 1709 aa4.92□□□□□ -1.62
UBR3-209ENST00000477461 CAMSAP1Q5T5Y3 1602 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 MROH1Q8NDA8 1641 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 INSIG1O15503 277 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 PHGDHO43175 533 aaKnown RBP4.91□□□□□ -1.62
UBR3-209ENST00000477461 RASSF9O75901 435 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 APEHP13798 732 aaKnown RBP4.91□□□□□ -1.62
UBR3-209ENST00000477461 HGFP14210 728 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 HOXB6P17509 224 aaKnown RBP4.91□□□□□ -1.62
UBR3-209ENST00000477461 UQCRC1P31930 480 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 BCAT1P54687 386 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 SUMO3P55854 103 aaPredicted RBP4.91□□□□□ -1.62
UBR3-209ENST00000477461 LINC00205P59089 165 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 SEC23BQ15437 767 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 OVCH2Q7RTZ1 564 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 KIAA0319LQ8IZA0 1049 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 SAMD14Q8IZD0 417 aaPredicted RBP4.91□□□□□ -1.62
UBR3-209ENST00000477461 MAFAQ8NHW3 353 aaPredicted RBP4.91□□□□□ -1.62
UBR3-209ENST00000477461 IL31RAQ8NI17 732 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 PNISRQ8TF01 805 aaKnown RBP4.91□□□□□ -1.62
UBR3-209ENST00000477461 WASF1Q92558 559 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 MAML1Q92585 1016 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 MAP4K1Q92918 833 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 COQ8BQ96D53 544 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 HS6ST2Q96MM7 605 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 STK31Q9BXU1 1019 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 B3GNT5Q9BYG0 378 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 CDY1Q9Y6F8 540 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 PZPP20742 1482 aa4.91□□□□□ -1.62
UBR3-209ENST00000477461 CLTCQ00610 1675 aaKnown RBP4.91□□□□□ -1.62
UBR3-209ENST00000477461 DHX57Q6P158 1386 aaKnown RBP4.91□□□□□ -1.62
UBR3-209ENST00000477461 CNTLNQ9NXG0 1405 aa4.9□□□□□ -1.62
UBR3-209ENST00000477461 BTBD19C9JJ37 291 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 FAM227AF5H4B4 570 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 TBX3O15119 743 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 SPRY2O43597 315 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 ZKSCAN1P17029 563 aaPredicted RBP4.9□□□□□ -1.63
UBR3-209ENST00000477461 MTHFSP49914 203 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 RANBP10Q6VN20 620 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 DCDC5Q6ZRR9 648 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 RAB11FIP4Q86YS3 637 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 C11orf44Q8N8P7 122 aa4.9□□□□□ -1.63
UBR3-209ENST00000477461 CTHRC1Q96CG8 243 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms