RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	TNFRSF6B	O95407	300 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	GLP2R	O95838	553 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	MYCL	P12524	364 aa	Predicted RBP	3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	NPPB	P16860	134 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	WT1	P19544	449 aa	Predicted RBP	3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	RENBP	P51606	427 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	ALDH18A1	P54886	795 aa	Known RBP	3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	SOX10	P56693	466 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	BFSP2	Q13515	415 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	SPARCL1	Q14515	664 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	ACOX1	Q15067	660 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	PFKFB4	Q16877	469 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	GRAMD1B	Q3KR37	738 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	ZACN	Q401N2	412 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	TMEM196	Q5HYL7	178 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	FAM83B	Q5T0W9	1011 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	GRHL2	Q6ISB3	625 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	KRTAP5-3	Q6L8H2	238 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	CCDC174	Q6PII3	467 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	TRIM72	Q6ZMU5	477 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	SFTPA1	Q8IWL2	248 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	TERB1	Q8NA31	727 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	ATG16L2	Q8NAA4	619 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	FAM71B	Q8TC56	605 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	EIF3C	Q99613	913 aa	Known RBP	3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	R3HDML	Q9H3Y0	253 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	HELLS	Q9NRZ9	838 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	ARPP21	Q9UBL0	812 aa	Predicted RBP	3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	SERGEF	Q9UGK8	458 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	SPATA31A6	Q5VVP1	1343 aa		3.88	□□□□□ -1.79
TARDBP-208	ENST00000477447	PNMA6E	A0A0J9YXQ4	647 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	LRRC3C	A6NJW4	275 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	TARM1	B6A8C7	271 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	SMIM22	K7EJ46	135 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	SYT5	O00445	386 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	ACKR2	O00590	384 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	TRIM38	O00635	465 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	FCHO1	O14526	889 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	SUV39H1	O43463	412 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	C1QL1	O75973	258 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	JTB	O76095	146 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	IGLV2-14	P01704	120 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	CSTB	P04080	98 aa	Known RBP	3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	AKT1	P31749	480 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	CHKA	P35790	457 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	GSTM5	P46439	218 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	DGKQ	P52824	942 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	COPB1	P53618	953 aa	Known RBP	3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	INHBE	P58166	350 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	GALNT1	Q10472	559 aa	Predicted RBP	3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	TUBB8	Q3ZCM7	444 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	AASDH	Q4L235	1098 aa	Predicted RBP	3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	CCDC38	Q502W7	563 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	SUMO4	Q6EEV6	95 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	FBXO42	Q6P3S6	717 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	SERPINA13P	Q6UXR4	307 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	RD3	Q7Z3Z2	195 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	TTC30A	Q86WT1	665 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	PNPLA1	Q8N8W4	532 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	MAFA	Q8NHW3	353 aa	Predicted RBP	3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	REPS1	Q96D71	796 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	ZG16B	Q96DA0	208 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	LTV1	Q96GA3	475 aa	Predicted RBP	3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	SNX18	Q96RF0	628 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	RMDN3	Q96TC7	470 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	USP29	Q9HBJ7	922 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	TMEM8A	Q9HCN3	771 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	FSCN3	Q9NQT6	498 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	TFCP2L1	Q9NZI6	479 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	PCDHB2	Q9Y5E7	798 aa		3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	POLR2A	P24928	1970 aa	Known RBP	3.87	□□□□□ -1.79
TARDBP-208	ENST00000477447	GCAT	O75600	419 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	TCEA3	O75764	348 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	ANXA6	P08133	673 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	ITGA5	P08648	1049 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	APEH	P13798	732 aa	Known RBP	3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	ZNF37A	P17032	561 aa	Predicted RBP	3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	KLRK1	P26718	216 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	ELL	P55199	621 aa	Predicted RBP	3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	HOXA4	Q00056	320 aa	Predicted RBP	3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	PTK2B	Q14289	1009 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	CSHL1	Q14406	222 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	KRT72	Q14CN4	511 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	TMEM119	Q4V9L6	283 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	CCDC144NL	Q6NUI1	221 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	TLDC1	Q6P9B6	456 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	KRT27	Q7Z3Y8	459 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	BCDIN3D	Q7Z5W3	292 aa	Known RBP	3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	ADGRG3	Q86Y34	549 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	CLASRP	Q8N2M8	674 aa	Known RBP	3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	FAM98A	Q8NCA5	519 aa	Known RBP	3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	PRR11	Q96HE9	360 aa	Predicted RBP	3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	HS6ST2	Q96MM7	605 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	PSMD1	Q99460	953 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	NUDT22	Q9BRQ3	303 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	CINP	Q9BW66	212 aa	Predicted RBP	3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	SAP30L	Q9HAJ7	183 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	VPS45	Q9NRW7	570 aa		3.86	□□□□□ -1.79
TARDBP-208	ENST00000477447	DACT1	Q9NYF0	836 aa		3.86	□□□□□ -1.79

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