RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 POP1Q99575 1024 aaKnown RBP19.11■□□□□ 0.65
VARS2-209ENST00000477288 IGFLR1Q9H665 355 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 DPP7Q9UHL4 492 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 KIAA1257Q9ULG3 409 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 A0A087WZ62 844 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 ABCB1P08183 1280 aaPredicted RBP19.11■□□□□ 0.65
VARS2-209ENST00000477288 SARSP49591 514 aaKnown RBP19.11■□□□□ 0.65
VARS2-209ENST00000477288 SCNN1BP51168 640 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 TRIM32Q13049 653 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 TYW3Q6IPR3 259 aaKnown RBP19.11■□□□□ 0.65
VARS2-209ENST00000477288 CGRRF1Q99675 332 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 FDXACB1Q9BRP7 624 aaPredicted RBP19.11■□□□□ 0.65
VARS2-209ENST00000477288 UNKQ9C0B0 810 aaKnown RBP19.11■□□□□ 0.65
VARS2-209ENST00000477288 TLR8Q9NR97 1041 aaKnown RBP19.11■□□□□ 0.65
VARS2-209ENST00000477288 TUBGCP4Q9UGJ1 667 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 GTF3C4Q9UKN8 822 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 FBXO21O94952 628 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 DSG3P32926 999 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 HSPA13P48723 471 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 TGM3Q08188 693 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 SGCGQ13326 291 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 SRLQ86TD4 932 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 SUGP1Q8IWZ8 645 aaKnown RBP19.11■□□□□ 0.65
VARS2-209ENST00000477288 SLC16A10Q8TF71 515 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 THG1LQ9NWX6 298 aaKnown RBP19.11■□□□□ 0.65
VARS2-209ENST00000477288 FBXO10Q9UK96 956 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 AP4E1Q9UPM8 1137 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 TIMM13Q9Y5L4 95 aaPredicted RBP19.11■□□□□ 0.65
VARS2-209ENST00000477288 ITGB6P18564 788 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 VHLP40337 213 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 GSTA3Q16772 222 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 ANKS1AQ92625 1134 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 SETD4Q9NVD3 440 aa19.11■□□□□ 0.65
VARS2-209ENST00000477288 CNTNAP4Q9C0A0 1308 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 ST13P50502 369 aaKnown RBP19.1■□□□□ 0.65
VARS2-209ENST00000477288 TRAF2Q12933 501 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 TPCN2Q8NHX9 752 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 FBXL21Q9UKT6 434 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 CSDE1O75534 798 aaKnown RBP19.1■□□□□ 0.65
VARS2-209ENST00000477288 GYPCP04921 128 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 RCN1Q15293 331 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 TRMT11Q7Z4G4 463 aaKnown RBP19.1■□□□□ 0.65
VARS2-209ENST00000477288 NACC2Q96BF6 587 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 ZSWIM1Q9BR11 485 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 FOXN3O00409 490 aaPredicted RBP19.1■□□□□ 0.65
VARS2-209ENST00000477288 GLP2RO95838 553 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 RAG1P15918 1043 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 FGFR2P21802 821 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 CCDC149Q6ZUS6 474 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 LPCAT1Q8NF37 534 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 ACOX2Q99424 681 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 SPRTNQ9H040 489 aaPredicted RBP19.1■□□□□ 0.65
VARS2-209ENST00000477288 RRAGCQ9HB90 399 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 MSH3P20585 1137 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 PON1P27169 355 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 TKTL1P51854 596 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 CCZ1BP86790 482 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 CCZ1P86791 482 aaPredicted RBP19.1■□□□□ 0.65
VARS2-209ENST00000477288 MIEF1Q9NQG6 463 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 PXMP2Q9NR77 195 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 RGS18Q9NS28 235 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 TMEM39AQ9NV64 488 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 N6AMT1Q9Y5N5 214 aa19.1■□□□□ 0.65
VARS2-209ENST00000477288 PDZK1P1A8MUH7 402 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 FNTAP49354 379 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 EPS8L3Q8TE67 593 aaKnown RBP19.09■□□□□ 0.65
VARS2-209ENST00000477288 CCDC126Q96EE4 140 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 RHBDL2Q9NX52 303 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 DDX43Q9NXZ2 648 aaKnown RBP19.09■□□□□ 0.65
VARS2-209ENST00000477288 THRAP10827 490 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 C11orf88Q6PI97 169 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 TRPC4APQ8TEL6 797 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 VTA1Q9NP79 307 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 SNTG2Q9NY99 539 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 UBP1Q9NZI7 540 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 JCHAINP01591 159 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 RFX5P48382 616 aaPredicted RBP19.09■□□□□ 0.65
VARS2-209ENST00000477288 GRB10Q13322 594 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 PTAR1Q7Z6K3 402 aaPredicted RBP19.09■□□□□ 0.65
VARS2-209ENST00000477288 PPP1R10Q96QC0 940 aaKnown RBP19.09■□□□□ 0.65
VARS2-209ENST00000477288 FHDC1Q9C0D6 1143 aaPredicted RBP19.09■□□□□ 0.65
VARS2-209ENST00000477288 LRRC40Q9H9A6 602 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.09■□□□□ 0.65
VARS2-209ENST00000477288 CSHL1Q14406 222 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 TFDP3Q5H9I0 405 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 SYN2Q92777 582 aaPredicted RBP19.09■□□□□ 0.65
VARS2-209ENST00000477288 TRIM13O60858 407 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 NECAB2Q7Z6G3 386 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 STRA8Q7Z7C7 330 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 CAMKK1Q8N5S9 505 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 TC2NQ8N9U0 490 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 CBWD1Q9BRT8 395 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 NDOR1Q9UHB4 597 aa19.09■□□□□ 0.65
VARS2-209ENST00000477288 TDRKHQ9Y2W6 561 aaKnown RBP19.09■□□□□ 0.65
VARS2-209ENST00000477288 TIMM44O43615 452 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 ATG16L2Q8NAA4 619 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 WDR36Q8NI36 951 aaKnown RBP19.08■□□□□ 0.65
VARS2-209ENST00000477288 MRPL48Q96GC5 212 aaKnown RBP19.08■□□□□ 0.65
VARS2-209ENST00000477288 HAO1Q9UJM8 370 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 PIPSLA2A3N6 862 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms