RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 Q6ZNB5 142 aa12.87□□□□□ -0.35
PRKD3-209ENST00000477132 HTR3DQ70Z44 454 aa12.87□□□□□ -0.35
PRKD3-209ENST00000477132 ALYREFQ86V81 257 aaKnown RBP12.87□□□□□ -0.35
PRKD3-209ENST00000477132 SFTPA1Q8IWL2 248 aa12.87□□□□□ -0.35
PRKD3-209ENST00000477132 ZNF606Q8WXB4 792 aa12.87□□□□□ -0.35
PRKD3-209ENST00000477132 CD101Q93033 1021 aa12.87□□□□□ -0.35
PRKD3-209ENST00000477132 POLR3BQ9NW08 1133 aaPredicted RBP12.87□□□□□ -0.35
PRKD3-209ENST00000477132 TBC1D14Q9P2M4 693 aa12.87□□□□□ -0.35
PRKD3-209ENST00000477132 DNMT3LQ9UJW3 386 aa12.87□□□□□ -0.35
PRKD3-209ENST00000477132 FBXO4Q9UKT5 387 aa12.87□□□□□ -0.35
PRKD3-209ENST00000477132 FHOD1Q9Y613 1164 aa12.87□□□□□ -0.35
PRKD3-209ENST00000477132 USP34Q70CQ2 3546 aa12.87□□□□□ -0.35
PRKD3-209ENST00000477132 PROB1E7EW31 1015 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 THAP12O43422 761 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 RNF40O75150 1001 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 HMBSP08397 361 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 CHRM1P11229 460 aaPredicted RBP12.86□□□□□ -0.35
PRKD3-209ENST00000477132 ADH5P11766 374 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 RPL34P49207 117 aaKnown RBP12.86□□□□□ -0.35
PRKD3-209ENST00000477132 DMWDQ09019 674 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 GRSF1Q12849 480 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRKD3-209ENST00000477132 BSPRYQ5W0U4 402 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 TMEM25Q86YD3 366 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 SIX6OS1Q8N1H7 587 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 SCML4Q8N228 414 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 ARHGAP18Q8N392 663 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 PHTF2Q8N3S3 785 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 SPEM1Q8N4L4 309 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 EDEM1Q92611 657 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 NELL1Q92832 810 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 FAM81BQ96LP2 452 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 IER2Q9BTL4 223 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 LSM14BQ9BX40 385 aaKnown RBP12.86□□□□□ -0.35
PRKD3-209ENST00000477132 VPS16Q9H269 839 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 CNGB3Q9NQW8 809 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 TJP2Q9UDY2 1190 aa12.86□□□□□ -0.35
PRKD3-209ENST00000477132 K7ESF4 209 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 FOXN3O00409 490 aaPredicted RBP12.85□□□□□ -0.35
PRKD3-209ENST00000477132 PES1O00541 588 aaKnown RBP12.85□□□□□ -0.35
PRKD3-209ENST00000477132 HOXC11O43248 304 aaPredicted RBP12.85□□□□□ -0.35
PRKD3-209ENST00000477132 ZNF18P17022 549 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 DRD1P21728 446 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 CLCN1P35523 988 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 CCR3P51677 355 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 AMPD2Q01433 879 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 MYL5Q02045 173 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 NR1H3Q13133 447 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 ZNF528Q3MIS6 628 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 KLHDC7AQ5VTJ3 777 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 BTBD8Q5XKL5 378 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 RSRC2Q7L4I2 434 aaKnown RBP12.85□□□□□ -0.35
PRKD3-209ENST00000477132 ASCL5Q7RTU5 278 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 APTXQ7Z2E3 356 aaKnown RBP12.85□□□□□ -0.35
PRKD3-209ENST00000477132 TADA2BQ86TJ2 420 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 SLC47A2Q86VL8 602 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 ETFBKMTQ8IXQ9 262 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 SYNPOQ8N3V7 929 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 WDTC1Q8N5D0 677 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 OTUB2Q96DC9 234 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 HSFY1Q96LI6 401 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 FUCA2Q9BTY2 467 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 NAA15Q9BXJ9 866 aaKnown RBP12.85□□□□□ -0.35
PRKD3-209ENST00000477132 MIS12Q9H081 205 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 GANQ9H2C0 597 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 SPHK2Q9NRA0 654 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 MARCH2Q9P0N8 246 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 SFMBT1Q9UHJ3 866 aa12.85□□□□□ -0.35
PRKD3-209ENST00000477132 SLC12A8A0AV02 714 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 E5RJQ4 531 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 K7EQS6 105 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 TRIM24O15164 1050 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 EPHB6O15197 1021 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 MSI1O43347 362 aaKnown RBP12.84□□□□□ -0.35
PRKD3-209ENST00000477132 MED7O43513 233 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 ADH1CP00326 375 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 FYNP06241 537 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 UCHL3P15374 230 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 CORO1AP31146 461 aaKnown RBP12.84□□□□□ -0.35
PRKD3-209ENST00000477132 CXCL12P48061 93 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
PRKD3-209ENST00000477132 GAD2Q05329 585 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 KDSRQ06136 332 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 GOLGA8FQ08AF8 430 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 GOLGA8DPQ0D2H9 430 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 PDCLQ13371 301 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 RAPGEF1Q13905 1077 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 DRAP1Q14919 205 aaPredicted RBP12.84□□□□□ -0.35
PRKD3-209ENST00000477132 MEA1Q16626 185 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 ANO6Q4KMQ2 910 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 PASD1Q8IV76 773 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 FAM71AQ8IYT1 594 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 AOPEPQ8N6M6 819 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 NAT16Q8N8M0 369 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 RPLP0P6Q8NHW5 317 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 IRGQQ8WZA9 623 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 PIWIL1Q96J94 861 aaKnown RBP12.84□□□□□ -0.35
PRKD3-209ENST00000477132 CDK5RAP1Q96SZ6 601 aaKnown RBP12.84□□□□□ -0.35
PRKD3-209ENST00000477132 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 ST7Q9NRC1 585 aa12.84□□□□□ -0.35
PRKD3-209ENST00000477132 LIMA1Q9UHB6 759 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms