RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CCDC70Q6NSX1 233 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 MAATS1Q7Z4T9 603 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 DDX53Q86TM3 631 aaKnown RBP15.06■□□□□ 0
COL4A6-206ENST00000477085 JAMLQ86YT9 394 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 CCDC26Q8TAB7 109 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 SPPL2BQ8TCT7 592 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 AUTS2Q8WXX7 1259 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 TMEM169Q96HH4 297 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 HERC2P3Q9BVR0 1158 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 CALN1Q9BXU9 219 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 ZMYND8Q9ULU4 1186 aaPredicted RBP15.06■□□□□ 0
COL4A6-206ENST00000477085 FZD10Q9ULW2 581 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 SCML2Q9UQR0 700 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 EFR3BQ9Y2G0 817 aa15.06■□□□□ 0
COL4A6-206ENST00000477085 LCHNA4D1U4 455 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 CST8O60676 142 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 SEC24AO95486 1093 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 ATF6P18850 670 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 ECHS1P30084 290 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 FNTAP49354 379 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 YWHAGP61981 247 aaKnown RBP eCLIP15.05■□□□□ -0
COL4A6-206ENST00000477085 DYNLT1P63172 113 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 DEUP1Q05D60 604 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 DPYSL2Q16555 572 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 MGAT5BQ3V5L5 792 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 ODF2Q5BJF6 829 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 KIAA1841Q6NSI8 718 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 PQLC3Q8N755 202 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 HNRNPLLQ8WVV9 542 aaKnown RBP15.05■□□□□ -0
COL4A6-206ENST00000477085 MAIP1Q8WWC4 291 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 HERVK_113Q902F9 699 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 SEC14L1Q92503 715 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 HAUS1Q96CS2 278 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 PGAP3Q96FM1 320 aaPredicted RBP15.05■□□□□ -0
COL4A6-206ENST00000477085 KCTD15Q96SI1 283 aaPredicted RBP15.05■□□□□ -0
COL4A6-206ENST00000477085 SEPT5Q99719 369 aaPredicted RBP15.05■□□□□ -0
COL4A6-206ENST00000477085 NCAPGQ9BPX3 1015 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 STAP1Q9ULZ2 295 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 AP4E1Q9UPM8 1137 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 NEU2Q9Y3R4 380 aa15.05■□□□□ -0
COL4A6-206ENST00000477085 A0A1W2PQH9 124 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 FAM92AA1XBS5 289 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 LIASO43766 372 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 LILRB3O75022 631 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 ABLIM3O94929 683 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 IGLV3-25P01717 112 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 TUBBP07437 444 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 TNFRSF8P28908 595 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 CETN2P41208 172 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 GLUD2P49448 558 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 SMARCB1Q12824 385 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 DHX34Q14147 1143 aaKnown RBP15.04■□□□□ -0
COL4A6-206ENST00000477085 BBS12Q6ZW61 710 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 BEND5Q7L4P6 421 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 TAC4Q86UU9 113 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 HERC6Q8IVU3 1022 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 VPS52Q8N1B4 723 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 PCDH19Q8TAB3 1148 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 CLP1Q92989 425 aaKnown RBP15.04■□□□□ -0
COL4A6-206ENST00000477085 SPATA17Q96L03 361 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 RNF157Q96PX1 679 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 DHX35Q9H5Z1 703 aaKnown RBP15.04■□□□□ -0
COL4A6-206ENST00000477085 NUDT5Q9UKK9 219 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 DNPEPQ9ULA0 475 aa15.04■□□□□ -0
COL4A6-206ENST00000477085 DAPK3O43293 454 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 PECAM1P16284 738 aaPredicted RBP15.03■□□□□ -0
COL4A6-206ENST00000477085 KRT81Q14533 505 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 PDK2Q15119 407 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 ANKRD20A8PQ5CZ79 823 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 DUPD1Q68J44 220 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 PSRC1Q6PGN9 363 aaPredicted RBP15.03■□□□□ -0
COL4A6-206ENST00000477085 NPNTQ6UXI9 565 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 IFT20Q8IY31 132 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 CCDC105Q8IYK2 499 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 FIBCD1Q8N539 461 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 DQX1Q8TE96 717 aaKnown RBP15.03■□□□□ -0
COL4A6-206ENST00000477085 GIPC2Q8TF65 315 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 C2orf15Q8WU43 125 aaKnown RBP15.03■□□□□ -0
COL4A6-206ENST00000477085 IFT81Q8WYA0 676 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 RUBCNQ92622 972 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 SLCO2A1Q92959 643 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 FAF2Q96CS3 445 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 ERP44Q9BS26 406 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 NEUROG2Q9H2A3 272 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 DDIT4Q9NX09 232 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 GMIPQ9P107 970 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 FBXW11Q9UKB1 542 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 INSL6Q9Y581 213 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 KIAA1671Q9BY89 1806 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 FAM187AA6NFU0 413 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 FGF18O76093 207 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 DESP17661 470 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 DNAJB2P25686 324 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 ADRA1BP35368 520 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 PPP6R3Q5H9R7 873 aaPredicted RBP15.03■□□□□ -0
COL4A6-206ENST00000477085 RASIP1Q5U651 963 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 DENND5BQ6ZUT9 1274 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 PRUNE1Q86TP1 453 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 RFX6Q8HWS3 928 aa15.03■□□□□ -0
COL4A6-206ENST00000477085 ZNF461Q8TAF7 563 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms