RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 FAM92AA1XBS5 289 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 GRXCR1A8MXD5 290 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 MDM4O15151 490 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 TEX28O15482 410 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 MYOGP15173 224 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 YWHAQP27348 245 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 ARSEP51690 589 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 PPP2R5EQ16537 467 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 TFDP3Q5H9I0 405 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 C8orf74Q6P047 294 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 CYP4F11Q9HBI6 524 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 RXFP1Q9HBX9 757 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 GMIPQ9P107 970 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 NR2E3Q9Y5X4 410 aa30.05■■■□□ 2.4
VEGFA-211ENST00000476772 DYNC1I1O14576 645 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 ARHGEF15O94989 841 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 CDH6P55285 790 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 CREMQ03060 361 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 ADCY2Q08462 1091 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 SHHQ15465 462 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 CA9Q16790 459 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 ERMARDQ5T6L9 678 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 FAM109BQ6ICB4 259 aaPredicted RBP30.04■■■□□ 2.4
VEGFA-211ENST00000476772 MON1AQ86VX9 555 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 MAIP1Q8WWC4 291 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 FBXO32Q969P5 355 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 PGAP3Q96FM1 320 aaPredicted RBP30.04■■■□□ 2.4
VEGFA-211ENST00000476772 C17orf80Q9BSJ5 609 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 FAM204AQ9H8W3 233 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 ALG13Q9NP73 1137 aaKnown RBP30.04■■■□□ 2.4
VEGFA-211ENST00000476772 DDIT4Q9NX09 232 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 HSFX1Q9UBD0 423 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 SSX2IPQ9Y2D8 614 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 SLC38A8A6NNN8 435 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 TAZQ16635 292 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 SPRED2Q7Z698 418 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 TAC4Q86UU9 113 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 DQX1Q8TE96 717 aaKnown RBP30.04■■■□□ 2.4
VEGFA-211ENST00000476772 OSER1Q9NX31 292 aa30.04■■■□□ 2.4
VEGFA-211ENST00000476772 PHF2O75151 1096 aa30.03■■■□□ 2.4
VEGFA-211ENST00000476772 CCDC70Q6NSX1 233 aa30.03■■■□□ 2.4
VEGFA-211ENST00000476772 TMC7Q7Z402 723 aa30.03■■■□□ 2.4
VEGFA-211ENST00000476772 CALN1Q9BXU9 219 aa30.03■■■□□ 2.4
VEGFA-211ENST00000476772 WDR6Q9NNW5 1121 aaKnown RBP30.03■■■□□ 2.4
VEGFA-211ENST00000476772 COMMD8Q9NX08 183 aa30.03■■■□□ 2.4
VEGFA-211ENST00000476772 AP4E1Q9UPM8 1137 aa30.03■■■□□ 2.4
VEGFA-211ENST00000476772 RWDD3Q9Y3V2 267 aa30.03■■■□□ 2.4
VEGFA-211ENST00000476772 CNPP09543 421 aaKnown RBP30.02■■■□□ 2.4
VEGFA-211ENST00000476772 TAF10Q12962 218 aa30.02■■■□□ 2.4
VEGFA-211ENST00000476772 DPYSL3Q14195 570 aa30.02■■■□□ 2.4
VEGFA-211ENST00000476772 KRT81Q14533 505 aa30.02■■■□□ 2.4
VEGFA-211ENST00000476772 ARHGAP18Q8N392 663 aa30.02■■■□□ 2.4
VEGFA-211ENST00000476772 GBF1Q92538 1859 aa30.02■■■□□ 2.4
VEGFA-211ENST00000476772 CEP295NLQ96MC4 621 aa30.02■■■□□ 2.4
VEGFA-211ENST00000476772 LZTS1Q9Y250 596 aa30.02■■■□□ 2.4
VEGFA-211ENST00000476772 YIPF1Q9Y548 306 aa30.02■■■□□ 2.4
VEGFA-211ENST00000476772 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP30.01■■■□□ 2.4
VEGFA-211ENST00000476772 CXCL14O95715 111 aa30.01■■■□□ 2.4
VEGFA-211ENST00000476772 CYP1B1Q16678 543 aa30.01■■■□□ 2.4
VEGFA-211ENST00000476772 HDAC7Q8WUI4 952 aa30.01■■■□□ 2.4
VEGFA-211ENST00000476772 PNKPQ96T60 521 aa30.01■■■□□ 2.4
VEGFA-211ENST00000476772 SLITRK6Q9H5Y7 841 aa30.01■■■□□ 2.4
VEGFA-211ENST00000476772 DHX35Q9H5Z1 703 aaKnown RBP30.01■■■□□ 2.4
VEGFA-211ENST00000476772 PCDH18Q9HCL0 1135 aa30.01■■■□□ 2.4
VEGFA-211ENST00000476772 FZD10Q9ULW2 581 aa30.01■■■□□ 2.4
VEGFA-211ENST00000476772 R3HDM2Q9Y2K5 976 aaKnown RBP30.01■■■□□ 2.4
VEGFA-211ENST00000476772 RAD51CO43502 376 aa30.01■■■□□ 2.39
VEGFA-211ENST00000476772 TJP3O95049 919 aa30.01■■■□□ 2.39
VEGFA-211ENST00000476772 ERVFC1P60507 584 aa30.01■■■□□ 2.39
VEGFA-211ENST00000476772 MMRN1Q13201 1228 aa30.01■■■□□ 2.39
VEGFA-211ENST00000476772 PDK2Q15119 407 aa30.01■■■□□ 2.39
VEGFA-211ENST00000476772 GLE1Q53GS7 698 aaKnown RBP30.01■■■□□ 2.39
VEGFA-211ENST00000476772 C1orf54Q8WWF1 131 aa30.01■■■□□ 2.39
VEGFA-211ENST00000476772 MAGOHBQ96A72 148 aaKnown RBP30.01■■■□□ 2.39
VEGFA-211ENST00000476772 TCF25Q9BQ70 676 aa30.01■■■□□ 2.39
VEGFA-211ENST00000476772 TTLL2Q9BWV7 592 aa30.01■■■□□ 2.39
VEGFA-211ENST00000476772 MAGEB5Q9BZ81 275 aa30.01■■■□□ 2.39
VEGFA-211ENST00000476772 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP30.01■■■□□ 2.394e-7■■■■■ 28.5
VEGFA-211ENST00000476772 MAGED2Q9UNF1 606 aaPredicted RBP30.01■■■□□ 2.39
VEGFA-211ENST00000476772 CSPG5O95196 566 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 F9P00740 461 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 IGLV3-25P01717 112 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 SLC7A5Q01650 507 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 DPYSL2Q16555 572 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 C12orf50Q8NA57 414 aaPredicted RBP30■■■□□ 2.39
VEGFA-211ENST00000476772 PARD6BQ9BYG5 372 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 PLEKHA4Q9H4M7 779 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 TMPRSS4Q9NRS4 437 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 AMACRQ9UHK6 382 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 NUDT5Q9UKK9 219 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 EFR3BQ9Y2G0 817 aa30■■■□□ 2.39
VEGFA-211ENST00000476772 PRRG1O14668 218 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 ELF1P32519 619 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 TTC27Q6P3X3 843 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 MAP7D3Q8IWC1 876 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 FAM71BQ8TC56 605 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 SPPL3Q8TCT6 385 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 RNF139Q8WU17 664 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 POF1BQ8WVV4 589 aa29.99■■■□□ 2.39
VEGFA-211ENST00000476772 ATG4AQ8WYN0 398 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms