RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 APEX2Q9UBZ4 518 aa11.14□□□□□ -0.63
PGK1-203ENST00000476531 GTF3C4Q9UKN8 822 aa11.14□□□□□ -0.63
PGK1-203ENST00000476531 PYCARDQ9ULZ3 195 aa11.14□□□□□ -0.63
PGK1-203ENST00000476531 MYO16Q9Y6X6 1858 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 PATE3B3GLJ2 98 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 GABRDO14764 452 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 KHNYNO15037 678 aaKnown RBP11.13□□□□□ -0.63
PGK1-203ENST00000476531 HUS1O60921 280 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 TOP3BO95985 862 aaKnown RBP11.13□□□□□ -0.63
PGK1-203ENST00000476531 CKMP06732 381 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 PLEKP08567 350 aaPredicted RBP11.13□□□□□ -0.63
PGK1-203ENST00000476531 KRT19P08727 400 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 HNRNPLP14866 589 aaKnown RBP eCLIP11.13□□□□□ -0.63
PGK1-203ENST00000476531 SPINK2P20155 84 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 GBP1P32455 592 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 NOP14P78316 857 aaKnown RBP11.13□□□□□ -0.63
PGK1-203ENST00000476531 ZBED6P86452 979 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 ZXDBP98169 803 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 FOXC1Q12948 553 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 RAPGEF1Q13905 1077 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 TRIM14Q14142 442 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 DRAP1Q14919 205 aaPredicted RBP11.13□□□□□ -0.63
PGK1-203ENST00000476531 CFAP221Q4G0U5 840 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 USP39Q53GS9 565 aaKnown RBP11.13□□□□□ -0.63
PGK1-203ENST00000476531 SH3PXD2AQ5TCZ1 1133 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 DAB2IPQ5VWQ8 1189 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 FAM171BQ6P995 826 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 WDR59Q6PJI9 974 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 SCARA5Q6ZMJ2 495 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 C11orf74Q86VG3 221 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 LRRC8AQ8IWT6 810 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 TMEM86AQ8N2M4 240 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 LRRC52Q8N7C0 313 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 KDF1Q8NAX2 398 aaPredicted RBP11.13□□□□□ -0.63
PGK1-203ENST00000476531 CCDC150Q8NCX0 1101 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 TTC16Q8NEE8 873 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 OLIG1Q8TAK6 271 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 FUBP3Q96I24 572 aaKnown RBP eCLIP11.13□□□□□ -0.63
PGK1-203ENST00000476531 NT5C1BQ96P26 610 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 DNAJC7Q99615 494 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 NUP58Q9BVL2 599 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 ABHD10Q9NUJ1 306 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 GDAP2Q9NXN4 497 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.13□□□□□ -0.63
PGK1-203ENST00000476531 ZMIZ1Q9ULJ6 1067 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 ARHGAP26Q9UNA1 814 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 LUC7L2Q9Y383 392 aaKnown RBP11.13□□□□□ -0.63
PGK1-203ENST00000476531 IGF2RP11717 2491 aa11.13□□□□□ -0.63
PGK1-203ENST00000476531 DSPP15924 2871 aaKnown RBP11.12□□□□□ -0.63
PGK1-203ENST00000476531 GOLGA6L6A8MZA4 724 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 ATP2C2O75185 946 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 CLSTN1O94985 981 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 ASS1P00966 412 aaKnown RBP11.12□□□□□ -0.63
PGK1-203ENST00000476531 SKILP12757 684 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 CSRP1P21291 193 aaKnown RBP11.12□□□□□ -0.63
PGK1-203ENST00000476531 MAGEA11P43364 429 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 AP3M2P53677 418 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 SEC13P55735 322 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 GSDMDP57764 484 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 NR1H3Q13133 447 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 SOWAHAQ2M3V2 549 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 ZNF699Q32M78 642 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 C2orf27AQ580R0 203 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 ANO7Q6IWH7 933 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 CYP2U1Q7Z449 544 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 LIMS2Q7Z4I7 341 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 SPATA2LQ8IUW3 424 aaPredicted RBP11.12□□□□□ -0.63
PGK1-203ENST00000476531 SCN4BQ8IWT1 228 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 ADGRF2Q8IZF7 708 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 PPM1KQ8N3J5 372 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 TOP6BLQ8N6T0 577 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 MDGA1Q8NFP4 955 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 SPATA18Q8TC71 538 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 CHP1Q99653 195 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 SDCBP2Q9H190 292 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 SMYD3Q9H7B4 428 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 ACP6Q9NPH0 428 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 TMEM9BQ9NQ34 198 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 ITGA11Q9UKX5 1188 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 MMP17Q9ULZ9 603 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 SNX9Q9Y5X1 595 aa11.12□□□□□ -0.63
PGK1-203ENST00000476531 ZNF638Q14966 1978 aaKnown RBP11.12□□□□□ -0.63
PGK1-203ENST00000476531 FAM170AA1A519 330 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 SOWAHDA6NJG2 315 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 F8VZ95 297 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 LEFTY2O00292 366 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 FOXN3O00409 490 aaPredicted RBP11.11□□□□□ -0.63
PGK1-203ENST00000476531 GFPT2O94808 682 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 NFATC1O95644 943 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 CYP17A1P05093 508 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 CEACAM1P13688 526 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 HDCP19113 662 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 ACO1P21399 889 aaKnown RBP11.11□□□□□ -0.63
PGK1-203ENST00000476531 FECHP22830 423 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 PCSK1P29120 753 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 ASPAP45381 313 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 LHX1P48742 406 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 USP46P62068 366 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 IRX4P78413 519 aa11.11□□□□□ -0.63
PGK1-203ENST00000476531 ARID5AQ03989 594 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms