RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 DNAJC17Q9NVM6 304 aaKnown RBP13.83□□□□□ -0.2
MRPL55-228ENST00000476267 USP25Q9UHP3 1055 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 PCDHA5Q9Y5H7 936 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 USP3Q9Y6I4 520 aa13.83□□□□□ -0.2
MRPL55-228ENST00000476267 TPRP12270 2363 aaKnown RBP13.83□□□□□ -0.2
MRPL55-228ENST00000476267 MUC22E2RYF6 1773 aaPredicted RBP13.82□□□□□ -0.2
MRPL55-228ENST00000476267 A0A1W2PQH9 124 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 UPK3BL1B0FP48 263 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 C1QTNF9BB2RNN3 333 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 UPK3BL2E5RIL1 263 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 NEDD8-MDP1E9PL57 170 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 MDM4O15151 490 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 MAP3K13O43283 966 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 AP5Z1O43299 807 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 TOP3BO95985 862 aaKnown RBP13.82□□□□□ -0.2
MRPL55-228ENST00000476267 C1QTNF9P0C862 333 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 TRIM49P0CI25 452 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 TRIM49CP0CI26 452 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 ACO1P21399 889 aaKnown RBP13.82□□□□□ -0.2
MRPL55-228ENST00000476267 VAMP7P51809 220 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 SEMA3BQ13214 749 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 ZCWPW2Q504Y3 356 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 UNQ6494/PRO21346Q6UXR6 183 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 CCDC186Q7Z3E2 898 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 PIP4P1Q86T03 277 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 SLC41A1Q8IVJ1 513 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 DEFB124Q8NES8 71 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 IPO4Q8TEX9 1081 aaKnown RBP13.82□□□□□ -0.2
MRPL55-228ENST00000476267 BBS2Q9BXC9 721 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 NT5C1AQ9BXI3 368 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 NUSAP1Q9BXS6 441 aaKnown RBP13.82□□□□□ -0.2
MRPL55-228ENST00000476267 NACA2Q9H009 215 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 CYP3A43Q9HB55 503 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 WDR35Q9P2L0 1181 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 NUDT5Q9UKK9 219 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 FRMD4BQ9Y2L6 1034 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 AKAP13Q12802 2813 aa13.82□□□□□ -0.2
MRPL55-228ENST00000476267 CALUO43852 315 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-228ENST00000476267 STC2O76061 302 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 CLSTN1O94985 981 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 PENKP01210 267 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-228ENST00000476267 KLKB1P03952 638 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 RARGP13631 454 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 NR2F2P24468 414 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 WASP42768 502 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 GCLMP48507 274 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 RPL6Q02878 288 aaKnown RBP13.81□□□□□ -0.2
MRPL55-228ENST00000476267 DPYDQ12882 1025 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 FOXC1Q12948 553 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 PPP1R26Q5T8A7 1209 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-228ENST00000476267 SLC36A4Q6YBV0 504 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 TPGS1Q6ZTW0 290 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 NUDT18Q6ZVK8 323 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 INTS8Q75QN2 995 aaKnown RBP13.81□□□□□ -0.2
MRPL55-228ENST00000476267 HSCBQ8IWL3 235 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 PGBD3Q8N328 593 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 KDF1Q8NAX2 398 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-228ENST00000476267 GATA6Q92908 595 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 JAKMIP2Q96AA8 810 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 XPO6Q96QU8 1125 aaKnown RBP13.81□□□□□ -0.2
MRPL55-228ENST00000476267 NIF3L1Q9GZT8 377 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 CD93Q9NPY3 652 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 FSCN3Q9NQT6 498 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.81□□□□□ -0.26e-6■■■■■ 48.1
MRPL55-228ENST00000476267 CLIC5Q9NZA1 410 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 LSM7Q9UK45 103 aaKnown RBP13.81□□□□□ -0.2
MRPL55-228ENST00000476267 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
MRPL55-228ENST00000476267 ZDHHC9Q9Y397 364 aa13.81□□□□□ -0.2
MRPL55-228ENST00000476267 MYO18AQ92614 2054 aaKnown RBP13.81□□□□□ -0.2
MRPL55-228ENST00000476267 CNOT1A5YKK6 2376 aaKnown RBP13.8□□□□□ -0.2
MRPL55-228ENST00000476267 GFRA2O00451 464 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 SERPINF2P08697 491 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 SPINK2P20155 84 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 MAPK8P45983 427 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 PLA2G4AP47712 749 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 DGKGP49619 791 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 PSEN1P49768 467 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 NDUFA8P51970 172 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 ZNF33AQ06730 810 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 GOLGA8FQ08AF8 430 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 GOLGA8DPQ0D2H9 430 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 ENPP2Q13822 863 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 DUOXA1Q1HG43 343 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 UAP1L1Q3KQV9 507 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 FYB2Q5VWT5 728 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 CHPFQ8IZ52 775 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 GUF1Q8N442 669 aaKnown RBP13.8□□□□□ -0.2
MRPL55-228ENST00000476267 RBBP8NLQ8NC74 664 aaPredicted RBP13.8□□□□□ -0.2
MRPL55-228ENST00000476267 CEP76Q8TAP6 659 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 SEMA4DQ92854 862 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 MRGPRX1Q96LB2 322 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 DUSP16Q9BY84 665 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 ADAM33Q9BZ11 813 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 SLC6A17Q9H1V8 727 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 TMEM8AQ9HCN3 771 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 DNMT3LQ9UJW3 386 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 SLC6A14Q9UN76 642 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 SLC27A6Q9Y2P4 619 aa13.8□□□□□ -0.2
MRPL55-228ENST00000476267 RAD54BQ9Y620 910 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms