RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 RBM15Q96T37 977 aaKnown RBP eCLIP19.86■□□□□ 0.772e-7■□□□□ 8.2
SYF2-204ENST00000476231 RTP3Q9BQQ7 232 aa19.86■□□□□ 0.77
SYF2-204ENST00000476231 RNF208Q9H0X6 261 aa19.86■□□□□ 0.77
SYF2-204ENST00000476231 LRRC4Q9HBW1 653 aa19.86■□□□□ 0.77
SYF2-204ENST00000476231 KRT82Q9NSB4 513 aa19.86■□□□□ 0.77
SYF2-204ENST00000476231 SHOC2Q9UQ13 582 aa19.86■□□□□ 0.77
SYF2-204ENST00000476231 TYMPP19971 482 aa19.85■□□□□ 0.77
SYF2-204ENST00000476231 ADIGQ0VDE8 80 aa19.85■□□□□ 0.77
SYF2-204ENST00000476231 RASA2Q15283 850 aa19.85■□□□□ 0.77
SYF2-204ENST00000476231 CYP4V2Q6ZWL3 525 aaPredicted RBP19.85■□□□□ 0.77
SYF2-204ENST00000476231 CNPY4Q8N129 248 aa19.85■□□□□ 0.77
SYF2-204ENST00000476231 TEKT4Q8WW24 435 aa19.85■□□□□ 0.77
SYF2-204ENST00000476231 HSPH1Q92598 858 aa19.85■□□□□ 0.77
SYF2-204ENST00000476231 TBCBQ99426 244 aa19.85■□□□□ 0.77
SYF2-204ENST00000476231 C11orf84Q9BUA3 381 aaPredicted RBP19.85■□□□□ 0.77
SYF2-204ENST00000476231 NGRNQ9NPE2 291 aaKnown RBP19.85■□□□□ 0.77
SYF2-204ENST00000476231 EURLQ9NYK6 297 aa19.85■□□□□ 0.77
SYF2-204ENST00000476231 GOLGA6L7A0A1B0GV03 622 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 TMEM189-UBE2V1I3L0A0 370 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 SMAPO00193 183 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 AP1G2O75843 785 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 BEST1O76090 585 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 ENDOD1O94919 500 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 VPS41P49754 854 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 GPNMBQ14956 572 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 BBS12Q6ZW61 710 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 THEM5Q8N1Q8 247 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 DBF4BQ8NFT6 615 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 HASPINQ8TF76 798 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 CENPIQ92674 756 aaPredicted RBP19.84■□□□□ 0.77
SYF2-204ENST00000476231 APBB2Q92870 758 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 PRMT1Q99873 361 aaKnown RBP19.84■□□□□ 0.77
SYF2-204ENST00000476231 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.84■□□□□ 0.77
SYF2-204ENST00000476231 ENPP3O14638 875 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 DDHD2O94830 711 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 MYCP01106 439 aaPredicted RBP19.84■□□□□ 0.77
SYF2-204ENST00000476231 ARSEP51690 589 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 MAP3K7CLP57077 242 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 MRPS5P82675 430 aaKnown RBP19.84■□□□□ 0.77
SYF2-204ENST00000476231 ADCY1Q08828 1119 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 INTS6LQ5JSJ4 861 aaKnown RBP19.84■□□□□ 0.77
SYF2-204ENST00000476231 FAM171BQ6P995 826 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 VSTM1Q6UX27 236 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 ZNF280BQ86YH2 543 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 SEPT8Q92599 483 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 SMARCD1Q96GM5 515 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 SAMD15Q9P1V8 674 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 PCDHB8Q9UN66 801 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 CAPN7Q9Y6W3 813 aa19.84■□□□□ 0.77
SYF2-204ENST00000476231 ALOX15BO15296 676 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 FBXO21O94952 628 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 PDK2Q15119 407 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 RAB6CQ53S08 254 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 OVOS1Q6IE37 1185 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 MAP7D3Q8IWC1 876 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 COLGALT2Q8IYK4 626 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 LRRC34Q8IZ02 419 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 SIX6OS1Q8N1H7 587 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 CCT6BQ92526 530 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 SMOQ99835 787 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 RAB6CQ9H0N0 254 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.83■□□□□ 0.77
SYF2-204ENST00000476231 TBC1D13Q9NVG8 400 aa19.83■□□□□ 0.77
SYF2-204ENST00000476231 TMEM120BA0PK00 339 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 DAB1O75553 588 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 ITGB1P05556 798 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 CD48P09326 243 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 RDXP35241 583 aaKnown RBP19.83■□□□□ 0.76
SYF2-204ENST00000476231 MATKP42679 507 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 SLC18A1P54219 525 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 CDH6P55285 790 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 HDAC4P56524 1084 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 MAPRE1Q15691 268 aaKnown RBP19.83■□□□□ 0.76
SYF2-204ENST00000476231 RNASEH2BQ5TBB1 312 aaKnown RBP19.83■□□□□ 0.76
SYF2-204ENST00000476231 SCYL2Q6P3W7 929 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 STRADAQ7RTN6 431 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 VSIG1Q86XK7 387 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 MYLPFQ96A32 169 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 FAM118BQ9BPY3 351 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 CSNK1G1Q9HCP0 422 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 NAALADL1Q9UQQ1 740 aa19.83■□□□□ 0.76
SYF2-204ENST00000476231 MDM4O15151 490 aa19.82■□□□□ 0.76
SYF2-204ENST00000476231 CST8O60676 142 aa19.82■□□□□ 0.76
SYF2-204ENST00000476231 PQBP1O60828 265 aaKnown RBP19.82■□□□□ 0.76
SYF2-204ENST00000476231 TKTL1P51854 596 aa19.82■□□□□ 0.76
SYF2-204ENST00000476231 YWHAZP63104 245 aaKnown RBP19.82■□□□□ 0.76
SYF2-204ENST00000476231 RNASELQ05823 741 aaKnown RBP19.82■□□□□ 0.76
SYF2-204ENST00000476231 ANKRD20A8PQ5CZ79 823 aa19.82■□□□□ 0.76
SYF2-204ENST00000476231 ARHGEF18Q6ZSZ5 1173 aa19.82■□□□□ 0.76
SYF2-204ENST00000476231 CKAP2Q8WWK9 683 aa19.82■□□□□ 0.76
SYF2-204ENST00000476231 FAM193BQ96PV7 902 aaPredicted RBP19.82■□□□□ 0.76
SYF2-204ENST00000476231 PKMYT1Q99640 499 aa19.82■□□□□ 0.76
SYF2-204ENST00000476231 CALN1Q9BXU9 219 aa19.82■□□□□ 0.76
SYF2-204ENST00000476231 FETUBQ9UGM5 382 aa19.82■□□□□ 0.76
SYF2-204ENST00000476231 PCDHB7Q9Y5E2 793 aa19.82■□□□□ 0.76
SYF2-204ENST00000476231 CCT8L1PA6NM43 557 aa19.81■□□□□ 0.76
SYF2-204ENST00000476231 B4GALT3O60512 393 aa19.81■□□□□ 0.76
SYF2-204ENST00000476231 GPS1Q13098 491 aa19.81■□□□□ 0.76
SYF2-204ENST00000476231 RAB41Q5JT25 222 aa19.81■□□□□ 0.76
SYF2-204ENST00000476231 PPP1R21Q6ZMI0 780 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms