RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 DNAJA2O60884 412 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 CD48P09326 243 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 YBX3P16989 372 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■■□□□ 12.1
CCM2-207ENST00000475551 PSMA2P25787 234 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 PMLP29590 882 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 JAK3P52333 1124 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 YWHAZP63104 245 aaKnown RBP18.37■□□□□ 0.53
CCM2-207ENST00000475551 MTMR1Q13613 665 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 BORAQ6PGQ7 559 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 TAS1R3Q7RTX0 852 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 ARFGAP1Q8N6T3 406 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 UBR7Q8N806 425 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 ZFP28Q8NHY6 868 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 USP6NLQ92738 828 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 CCDC124Q96CT7 223 aaKnown RBP18.37■□□□□ 0.53
CCM2-207ENST00000475551 DCUN1D1Q96GG9 259 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 ZNF778Q96MU6 729 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 FAM96AQ9H5X1 160 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 PSMD13Q9UNM6 376 aa18.37■□□□□ 0.53
CCM2-207ENST00000475551 ARHGAP10A1A4S6 786 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 PLA2G6O60733 806 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 AVILO75366 819 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 LRCH4O75427 683 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 STK10O94804 968 aaKnown RBP18.36■□□□□ 0.53
CCM2-207ENST00000475551 ITGAXP20702 1163 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 ACAT1P24752 427 aaKnown RBP18.36■□□□□ 0.53
CCM2-207ENST00000475551 KCNT1Q5JUK3 1230 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 ZCCHC23Q6ZST2 131 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 RFX6Q8HWS3 928 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 NDUFAF2Q8N183 169 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 POPDC2Q9HBU9 364 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 UBAP1Q9NZ09 502 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 ARHGAP28Q9P2N2 729 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 DNAJC16Q9Y2G8 782 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 TELO2Q9Y4R8 837 aa18.36■□□□□ 0.53
CCM2-207ENST00000475551 TNFAIP8O95379 198 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 CDH5P33151 784 aaPredicted RBP18.35■□□□□ 0.53
CCM2-207ENST00000475551 ADARP55265 1226 aaKnown RBP18.35■□□□□ 0.53
CCM2-207ENST00000475551 NLRP11P59045 1033 aaKnown RBP18.35■□□□□ 0.53
CCM2-207ENST00000475551 BMPR2Q13873 1038 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 USP41Q3LFD5 358 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 STXBP5Q5T5C0 1151 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 HPS6Q86YV9 775 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 DEFB107AQ8IZN7 70 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 DIS3LQ8TF46 1054 aaKnown RBP18.35■□□□□ 0.53
CCM2-207ENST00000475551 GAB3Q8WWW8 586 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 FAF2Q96CS3 445 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 SMYD2Q9NRG4 433 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 ZC3H7BQ9UGR2 993 aaKnown RBP18.35■□□□□ 0.53
CCM2-207ENST00000475551 CCDC160A6NGH7 325 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 WDR64B1ANS9 1081 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 STAM2O75886 525 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 SFNP31947 248 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 NRLP54845 237 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 EMP3P54852 163 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 MTTPP55157 894 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 MRPS9P82933 396 aaKnown RBP18.35■□□□□ 0.53
CCM2-207ENST00000475551 ROR1Q01973 937 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 MYLK3Q32MK0 819 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 PQLC1Q8N2U9 271 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 HIPK4Q8NE63 616 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 PPP1R14CQ8TAE6 165 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 SPATA18Q8TC71 538 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 ACER1Q8TDN7 264 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 DDI1Q8WTU0 396 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 GFM2Q969S9 779 aaKnown RBP18.35■□□□□ 0.53
CCM2-207ENST00000475551 SENP6Q9GZR1 1112 aaPredicted RBP18.35■□□□□ 0.53
CCM2-207ENST00000475551 PLAC1Q9HBJ0 212 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 DDX18Q9NVP1 670 aaKnown RBP18.35■□□□□ 0.53
CCM2-207ENST00000475551 DNAJC28Q9NX36 388 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 COL4A5P29400 1685 aa18.35■□□□□ 0.53
CCM2-207ENST00000475551 hCG_2014768A0A024R1R8 64 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 TOM1L1O75674 476 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 EIF4BP23588 611 aaKnown RBP18.34■□□□□ 0.53
CCM2-207ENST00000475551 LIG4P49917 911 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 SOX10P56693 466 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 DCTN2Q13561 401 aaKnown RBP18.34■□□□□ 0.53
CCM2-207ENST00000475551 FASTKD1Q53R41 847 aaKnown RBP18.34■□□□□ 0.53
CCM2-207ENST00000475551 TEDDM1Q5T9Z0 273 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 MBLAC2Q68D91 279 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 TIFABQ6ZNK6 161 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 FAM160B2Q86V87 743 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 TMEM126BQ8IUX1 230 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 WDTC1Q8N5D0 677 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 FNIP1Q8TF40 1166 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 KCNK16Q96T55 309 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 CYP4F11Q9HBI6 524 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 STYXL1Q9Y6J8 313 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 APOEP02649 317 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 PRDX6P30041 224 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 ABCD1P33897 745 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 RFC1P35251 1148 aaPredicted RBP18.34■□□□□ 0.53
CCM2-207ENST00000475551 CREB5Q02930 508 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 TCHHL1Q5QJ38 904 aaPredicted RBP18.34■□□□□ 0.53
CCM2-207ENST00000475551 ADGRF2Q8IZF7 708 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 LRRC43Q8N309 656 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 ZNF541Q9H0D2 1346 aa18.34■□□□□ 0.53
CCM2-207ENST00000475551 HMX2A2RU54 273 aa18.33■□□□□ 0.53
CCM2-207ENST00000475551 H0YCG3 227 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms