RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CFAP47Q6ZTR5 3102 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 KMT2BQ9UMN6 2715 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 WASH3PC4AMC7 463 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 NEDD8-MDP1E9PL57 170 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 CACNG3O60359 315 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 GABBR2O75899 941 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 KRT37O76014 449 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 STC2O76061 302 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 KIF20AO95235 890 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 KRT13P13646 458 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 TYRP14679 529 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 CD44P16070 742 aaKnown RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 GABRG2P18507 467 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 PMLP29590 882 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 GTF2H1P32780 548 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 PLA2G4AP47712 749 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 DHPSP49366 369 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 HSF5Q4G112 596 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 RAB41Q5JT25 222 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 EOGTQ5NDL2 527 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 C10orf120Q5SQS8 335 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 FYB2Q5VWT5 728 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 EGFLAMQ63HQ2 1017 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 RNF43Q68DV7 783 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 IL31Q6EBC2 164 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 CCDC186Q7Z3E2 898 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 PIGZQ86VD9 579 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 ZC3H3Q8IXZ2 948 aaKnown RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 ZNF276Q8N554 614 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 DEFB119Q8N690 84 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 UBR7Q8N806 425 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 ZNF513Q8N8E2 541 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 RBBP8NLQ8NC74 664 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 BHMTQ93088 406 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 TMEM176AQ96HP8 235 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 HEXIM2Q96MH2 286 aaKnown RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 GABRG3Q99928 467 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 ZSWIM1Q9BR11 485 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 BBS2Q9BXC9 721 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 UBXN6Q9BZV1 441 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 SLC6A17Q9H1V8 727 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 CD93Q9NPY3 652 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 FSCN3Q9NQT6 498 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 DNAJC17Q9NVM6 304 aaKnown RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 RAB20Q9NX57 234 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 PLK2Q9NYY3 685 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 CLIC5Q9NZA1 410 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 CALCOCO1Q9P1Z2 691 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 NAGPAQ9UK23 515 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 AGO1Q9UL18 857 aaKnown RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 WASF3Q9UPY6 502 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 COQ4Q9Y3A0 265 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 PCDHA5Q9Y5H7 936 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 TPRP12270 2363 aaKnown RBP7.39□□□□□ -1.23
HDAC3-207ENST00000475549 WDFY3Q8IZQ1 3526 aa7.39□□□□□ -1.23
HDAC3-207ENST00000475549 OBSL1O75147 1896 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 TRIM49BA6NDI0 452 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 KHNYNO15037 678 aaKnown RBP7.38□□□□□ -1.23
HDAC3-207ENST00000475549 ALDH1A2O94788 518 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 TOP3BO95985 862 aaKnown RBP7.38□□□□□ -1.23
HDAC3-207ENST00000475549 PENKP01210 267 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-207ENST00000475549 BMP6P22004 513 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 ITPKAP23677 461 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 TKTL1P51854 596 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 COBLL1Q53SF7 1204 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 BTBD8Q5XKL5 378 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 ARHGAP17Q68EM7 881 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 PM20D1Q6GTS8 502 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 GRAMD4Q6IC98 578 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 PSAPL1Q6NUJ1 521 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 ARMCX6Q7L4S7 300 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 SLC41A1Q8IVJ1 513 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 ANKRD52Q8NB46 1076 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 FBXL13Q8NEE6 735 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 TFAP2BQ92481 460 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 DDX1Q92499 740 aaKnown RBP7.38□□□□□ -1.23
HDAC3-207ENST00000475549 PIGKQ92643 395 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 SLC35C1Q96A29 364 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 FAXDC2Q96IV6 333 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 MRGPRX1Q96LB2 322 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 EDEM2Q9BV94 578 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 POLMQ9NP87 494 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-207ENST00000475549 CACNA2D2Q9NY47 1150 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 BCCIPQ9P287 314 aaKnown RBP eCLIP7.38□□□□□ -1.23
HDAC3-207ENST00000475549 WDR35Q9P2L0 1181 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 PILRBQ9UKJ0 227 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 GTF3C3Q9Y5Q9 886 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 RAD54BQ9Y620 910 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 TCHHQ07283 1943 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 GREB1Q4ZG55 1949 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 DENND4CQ5VZ89 1909 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 CEP295Q9C0D2 2601 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 ZZEF1O43149 2961 aa7.38□□□□□ -1.23
HDAC3-207ENST00000475549 ANAPC1Q9H1A4 1944 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 ATXN2Q99700 1313 aaKnown RBP7.37□□□□□ -1.23
HDAC3-207ENST00000475549 IGHV1OR15-9A0A0B4J2B8 117 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 RNF225M0QZC1 329 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-207ENST00000475549 GFRA2O00451 464 aa7.37□□□□□ -1.23
HDAC3-207ENST00000475549 CETN3O15182 167 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms