RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 BEND5Q7L4P6 421 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 CTAGE6Q86UF2 777 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 CTAGE4Q8IX94 777 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 NDRG1Q92597 394 aaKnown RBP10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 MRPS31Q92665 395 aaKnown RBP10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 PSMG2Q969U7 264 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 TRMT2BQ96GJ1 504 aaKnown RBP10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 RPGRIP1Q96KN7 1286 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 TBCBQ99426 244 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 CDCA3Q99618 268 aaPredicted RBP10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 PIDD1Q9HB75 910 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 MAN1C1Q9NR34 630 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 CLIC5Q9NZA1 410 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 RASAL2Q9UJF2 1139 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 NAALADL1Q9UQQ1 740 aa10.71□□□□□ -0.69
PRPF38A-202ENST00000474048 A0A1W2PPC1 479 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 FSCN2O14926 492 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 DAPK3O43293 454 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 LILRB3O75022 631 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 TRUB2O95900 331 aaKnown RBP10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 RARGP13631 454 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 ATP5C1P36542 298 aaKnown RBP10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 ARL4AP40617 200 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 CLCN4P51793 760 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 COPS2P61201 443 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 OGDHQ02218 1023 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 MTA1Q13330 715 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 MTMR3Q13615 1198 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 SMTNL2Q2TAL5 461 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 HECTD3Q5T447 861 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 HFE2Q6ZVN8 426 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 RBM23Q86U06 439 aaKnown RBP10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 KATNAL2Q8IYT4 538 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 RCOR2Q8IZ40 523 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 LEMD2Q8NC56 503 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 EXD1Q8NHP7 514 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 HDAC7Q8WUI4 952 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 TEKT4Q8WW24 435 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 TTLL2Q9BWV7 592 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 CALN1Q9BXU9 219 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 CRISPLD1Q9H336 500 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 SMOC2Q9H3U7 446 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 WDCPQ9H6R7 721 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 TRPC7Q9HCX4 862 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 DZANK1Q9NVP4 752 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 MRFAP1Q9Y605 127 aa10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 ZNF638Q14966 1978 aaKnown RBP10.7□□□□□ -0.7
PRPF38A-202ENST00000474048 COL4A4P53420 1690 aaPredicted RBP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 GREB1Q4ZG55 1949 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 CCL16O15467 120 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 DDX3YO15523 660 aaKnown RBP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 TLR5O60602 858 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 SRGAP2O75044 1071 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 CLASP2O75122 1294 aaKnown RBP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 GABBR2O75899 941 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 ARHGEF15O94989 841 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 SLU7O95391 586 aaKnown RBP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 VNN2O95498 520 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 HNRNPA1P09651 372 aaKnown RBP eCLIP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 MYL4P12829 197 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 DNAJB1P25685 340 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 CCR1P32246 355 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 IRS1P35568 1242 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 NRIP1P48552 1158 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 CDH6P55285 790 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 USP46P62068 366 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 TUBB4BP68371 445 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 ZNF252P-AS1Q0IIN9 211 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 EFEMP1Q12805 493 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 PDK2Q15119 407 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 PPP6R3Q5H9R7 873 aaPredicted RBP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 BRMS1LQ5PSV4 323 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 ERMARDQ5T6L9 678 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 DAB2IPQ5VWQ8 1189 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 SYPL2Q5VXT5 272 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 PDZD4Q76G19 769 aaPredicted RBP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 DNAJB7Q7Z6W7 309 aaPredicted RBP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 TAC4Q86UU9 113 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 FAM131BQ86XD5 332 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 MIB1Q86YT6 1006 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 ATP6V0D2Q8N8Y2 350 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 ADAM32Q8TC27 787 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 DQX1Q8TE96 717 aaKnown RBP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 KRT35Q92764 455 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 CASP10Q92851 521 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 MRPL38Q96DV4 380 aaKnown RBP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 NPY6RQ99463 290 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 CORO1BQ9BR76 489 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 SLITRK6Q9H5Y7 841 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 DHX35Q9H5Z1 703 aaKnown RBP10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 ZDHHC7Q9NXF8 308 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 MARCH2Q9P0N8 246 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 DNMT3LQ9UJW3 386 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 AP4E1Q9UPM8 1137 aa10.69□□□□□ -0.7
PRPF38A-202ENST00000474048 MTCL1Q9Y4B5 1905 aaKnown RBP10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 CLUHO75153 1309 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 SLC12A8A0AV02 714 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 FAM92AA1XBS5 289 aa10.68□□□□□ -0.7
PRPF38A-202ENST00000474048 H3BRJ5 948 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms