RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SUSD2Q9UGT4 822 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 PCOLCE2Q9UKZ9 415 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 EXOC7Q9UPT5 735 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 APOBEC2Q9Y235 224 aaKnown RBP5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 KIF3AQ9Y496 699 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 NFE2L3Q9Y4A8 694 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 PCDHB9Q9Y5E1 797 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 SPTA1P02549 2419 aa5.45□□□□□ -1.54
SNRNP40-204ENST00000474025 PTPRBP23467 1997 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 FAM92AA1XBS5 289 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 FRMD3A2A2Y4 597 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 PRRT4C9JH25 899 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 H3BQV1 296 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 CLDN5O00501 218 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 CACNG3O60359 315 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 GREM1O60565 184 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 EIF5BO60841 1220 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 TACC1O75410 805 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 RTN3O95197 1032 aaPredicted RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 BMP15O95972 392 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 TNNC2P02585 160 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 ZDHHC11BP0C7U3 371 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 ZNF883P0CG24 379 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 IRF1P10914 325 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 GNSP15586 552 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 PTPN1P18031 435 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 MAOBP27338 520 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 YWHAQP27348 245 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 CD6P30203 668 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 TUBP50607 506 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 SLC5A3P53794 718 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 BNC1Q01954 994 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 IFRD2Q12894 506 aaPredicted RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 ALCAMQ13740 583 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 DUOXA2Q1HG44 320 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 ANO4Q32M45 955 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 WDR45BQ5MNZ6 344 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 HECTD3Q5T447 861 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 SNX30Q5VWJ9 437 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 GRAMD4Q6IC98 578 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 USP49Q70CQ1 688 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 HS2ST1Q7LGA3 356 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 TMPRSS7Q7RTY8 843 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 MARCH9Q86YJ5 346 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 CBWD2Q8IUF1 395 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 CHPFQ8IZ52 775 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 SYCP3Q8IZU3 236 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 NUP93Q8N1F7 819 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 GPD1LQ8N335 351 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 ZCCHC9Q8N567 271 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 B3GALNT2Q8NCR0 500 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 PDZD8Q8NEN9 1154 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 SCAMP5Q8TAC9 235 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 ADAM32Q8TC27 787 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 NOC3LQ8WTT2 800 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 OVCA2Q8WZ82 227 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 FOXJ1Q92949 421 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 ERLEC1Q96DZ1 483 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 CRELD1Q96HD1 420 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 EPSTI1Q96J88 318 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 MMS19Q96T76 1030 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 B3GNT5Q9BYG0 378 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 TRIM9Q9C026 710 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 SLC6A16Q9GZN6 736 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 DPEP3Q9H4B8 488 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 PCIF1Q9H4Z3 704 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 CCSER2Q9H7U1 834 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 IL21RQ9HBE5 538 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 DNAJC17Q9NVM6 304 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 IL37Q9NZH6 218 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 KIAA1522Q9P206 1035 aaPredicted RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 USP36Q9P275 1121 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 STK17AQ9UEE5 414 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 FNDC3AQ9Y2H6 1198 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 SH3BP1Q9Y3L3 701 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 R3HCC1Q9Y3T6 440 aaKnown RBP5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 RAD54BQ9Y620 910 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 KNTC1P50748 2209 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 PIEZO2Q9H5I5 2752 aa5.44□□□□□ -1.54
SNRNP40-204ENST00000474025 A0A087WV48 116 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 A0A1B0GTW7 788 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 ZNF233A6NK53 670 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 KCNJ18B7U540 433 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 NEDD8-MDP1E9PL57 170 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 GFRA2O00451 464 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 KIAA0391O15091 583 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 ZBTB24O43167 697 aaPredicted RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 TLR5O60602 858 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 NDUFS2O75306 463 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 CILPO75339 1184 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 PRPF6O94906 941 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 CER1O95813 267 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 NTRK1P04629 796 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 FAM163BP0C2L3 166 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 ATXN1LP0C7T5 689 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 NCAM1P13591 858 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 TYRP14679 529 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 GNL1P36915 607 aaPredicted RBP5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 PGFP49763 221 aa5.43□□□□□ -1.54
SNRNP40-204ENST00000474025 SF3A1Q15459 793 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms