RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 RSRC2Q7L4I2 434 aaKnown RBP19.84■□□□□ 0.77
PTCD3-210ENST00000473829 C12orf40Q86WS4 652 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 WDTC1Q8N5D0 677 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 CDK5RAP1Q96SZ6 601 aaKnown RBP19.84■□□□□ 0.77
PTCD3-210ENST00000473829 PHOX2BQ99453 314 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 SLC4A5Q9BY07 1137 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 ST7Q9NRC1 585 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 FAM207AQ9NSI2 230 aaPredicted RBP19.84■□□□□ 0.77
PTCD3-210ENST00000473829 MARCH2Q9P0N8 246 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 TBC1D14Q9P2M4 693 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 PCDHGC3Q9UN70 934 aa19.84■□□□□ 0.77
PTCD3-210ENST00000473829 F8VZ95 297 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 EGFP01133 1207 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 KLKB1P03952 638 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 PTMSP20962 102 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 CDK11BP21127 795 aaKnown RBP19.83■□□□□ 0.77
PTCD3-210ENST00000473829 PLA2G5P39877 138 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 PTK2Q05397 1052 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 MESP2Q0VG99 397 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 NR1H3Q13133 447 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 PDCLQ13371 301 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 LRRC32Q14392 662 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 IQCB1Q15051 598 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 LY6G5CQ5SRR4 150 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 SMYD5Q6GMV2 418 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 SCUBE3Q8IX30 993 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 ANKRD20A12PQ8NF67 263 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 STK32AQ8WU08 396 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 IRGQQ8WZA9 623 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 P2RY13Q9BPV8 354 aa19.83■□□□□ 0.77
PTCD3-210ENST00000473829 ATG2BQ96BY7 2078 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 E5RJQ4 531 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 PAPSS1O43252 624 aaPredicted RBP19.82■□□□□ 0.76
PTCD3-210ENST00000473829 FBXO21O94952 628 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 ADH5P11766 374 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 POLR2FP61218 127 aaKnown RBP19.82■□□□□ 0.76
PTCD3-210ENST00000473829 GOLGA8FQ08AF8 430 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 GOLGA8DPQ0D2H9 430 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 DGKKQ5KSL6 1271 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 PKN3Q6P5Z2 889 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 TMEM25Q86YD3 366 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 CD101Q93033 1021 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 OTUB2Q96DC9 234 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 PIWIL1Q96J94 861 aaKnown RBP19.82■□□□□ 0.76
PTCD3-210ENST00000473829 STK33Q9BYT3 514 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 ABCC13Q9NSE7 274 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 C2orf42Q9NWW7 574 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 SFMBT1Q9UHJ3 866 aa19.82■□□□□ 0.76
PTCD3-210ENST00000473829 LSM7Q9UK45 103 aaKnown RBP19.82■□□□□ 0.76
PTCD3-210ENST00000473829 SLC12A8A0AV02 714 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 ANTXRLA6NF34 631 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 MSI1O43347 362 aaKnown RBP19.81■□□□□ 0.76
PTCD3-210ENST00000473829 ADH1CP00326 375 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 LTFP02788 710 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 FYNP06241 537 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 CYP11B1P15538 503 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 SLC6A11P48066 632 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 JAM2P57087 298 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 AMPD2Q01433 879 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 UBXN1Q04323 297 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 GRSF1Q12849 480 aaKnown RBP eCLIP19.81■□□□□ 0.76
PTCD3-210ENST00000473829 ZSCAN23Q3MJ62 389 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 TMEM110Q86TL2 294 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 FMNL3Q8IVF7 1028 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 C1orf131Q8NDD1 294 aaKnown RBP19.81■□□□□ 0.76
PTCD3-210ENST00000473829 ATOH1Q92858 354 aaPredicted RBP19.81■□□□□ 0.76
PTCD3-210ENST00000473829 FAM122AQ96E09 287 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 P2RY11Q96G91 374 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 ERGIC2Q96RQ1 377 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 CPXM1Q96SM3 734 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 NLRC4Q9NPP4 1024 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 PRMT8Q9NR22 394 aaPredicted RBP19.81■□□□□ 0.76
PTCD3-210ENST00000473829 SPHK2Q9NRA0 654 aa19.81■□□□□ 0.76
PTCD3-210ENST00000473829 OLA1Q9NTK5 396 aaKnown RBP19.81■□□□□ 0.76
PTCD3-210ENST00000473829 FANCMQ8IYD8 2048 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 SMTNL1A8MU46 457 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 LAMTOR5O43504 91 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 SP9P0CG40 484 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 CORO1AP31146 461 aaKnown RBP19.8■□□□□ 0.76
PTCD3-210ENST00000473829 ACADSBP45954 432 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 COG7P83436 770 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 MSANTD2Q6P1R3 559 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 TSSK4Q6SA08 328 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 NOP9Q86U38 636 aaKnown RBP19.8■□□□□ 0.76
PTCD3-210ENST00000473829 SFTPA1Q8IWL2 248 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 RNF139Q8WU17 664 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 DDX1Q92499 740 aaKnown RBP19.8■□□□□ 0.76
PTCD3-210ENST00000473829 LHX5Q9H2C1 402 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 CBX8Q9HC52 389 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 STRIP2Q9ULQ0 834 aa19.8■□□□□ 0.76
PTCD3-210ENST00000473829 FAM170AA1A519 330 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 TEX33O43247 280 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 HOXC11O43248 304 aaPredicted RBP19.79■□□□□ 0.76
PTCD3-210ENST00000473829 DRD1P21728 446 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 HOXC13P31276 330 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 KRT9P35527 623 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 BPIFB4P59827 614 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 SATB1Q01826 763 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 TAF3Q5VWG9 929 aa19.79■□□□□ 0.76
PTCD3-210ENST00000473829 LUZP1Q86V48 1076 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms