RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PLPPR4Q7Z2D5 763 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 SLC26A11Q86WA9 606 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 TTC30AQ86WT1 665 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 UNC5BQ8IZJ1 945 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 RTP4Q96DX8 246 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 HPDLQ96IR7 371 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 FDXACB1Q9BRP7 624 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 SLC17A6Q9P2U8 582 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 ZSWIM8A7E2V4 1837 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 PPEF2O14830 753 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 GAS2O43903 313 aaKnown RBP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 CCDC22O60826 627 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 IL18RAPO95256 599 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 TGDSO95455 350 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 VDRP11473 427 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 ARF4P18085 180 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 SESN3P58005 492 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 INCA1Q0VD86 236 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 BST1Q10588 318 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 PPP1R26Q5T8A7 1209 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 CAPRIN2Q6IMN6 1127 aaKnown RBP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 OLFML1Q6UWY5 402 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 UNC5AQ6ZN44 842 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 SCUBE3Q8IX30 993 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 OXNAD1Q96HP4 312 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 SNRNP25Q9BV90 132 aaKnown RBP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 SLC13A1Q9BZW2 595 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 VRTNQ9H8Y1 702 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 GBA2Q9HCG7 927 aaPredicted RBP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 PCDH18Q9HCL0 1135 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 PNPLA8Q9NP80 782 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 NGRNQ9NPE2 291 aaKnown RBP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 ETNK2Q9NVF9 386 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 ZC3H7BQ9UGR2 993 aaKnown RBP11.36□□□□□ -0.59
C9orf3-214ENST00000473778 PLLPQ9Y342 182 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 MFHAS1Q9Y4C4 1052 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 IKBKGQ9Y6K9 419 aa11.36□□□□□ -0.59
C9orf3-214ENST00000473778 SMAPO00193 183 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 FCHO1O14526 889 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 MAP3K13O43283 966 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 PRPSAP2O60256 369 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 VTNP04004 478 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 PRKCHP24723 683 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 ADORA2AP29274 412 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 ERFP50548 548 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 HDAC4P56524 1084 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 GBE1Q04446 702 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 TEX44Q53QW1 395 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 MDH1BQ5I0G3 518 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 SLC9A4Q6AI14 798 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 ATG14Q6ZNE5 492 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 HOMEZQ8IX15 550 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 NETO2Q8NC67 525 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 SHKBP1Q8TBC3 707 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 CLEC4CQ8WTT0 213 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 FAM172AQ8WUF8 416 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 NSL1Q96IY1 281 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 ACAP3Q96P50 834 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 MAF1Q9H063 256 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 RNF19AQ9NV58 838 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 MARCOQ9UEW3 520 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-214ENST00000473778 BARX2Q9UMQ3 279 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-214ENST00000473778 PLXNA1Q9UIW2 1896 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 CAPN14A8MX76 684 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 F5H423 210 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-214ENST00000473778 COPEO14579 308 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 GYG2O15488 501 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 RARBP10826 455 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 MAGEA3P43357 314 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 KRT81Q14533 505 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 PDCD2Q16342 344 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-214ENST00000473778 PKDCCQ504Y2 493 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 PPP6R3Q5H9R7 873 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-214ENST00000473778 TTC39BQ5VTQ0 682 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-214ENST00000473778 LCLAT1Q6UWP7 414 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 GADL1Q6ZQY3 521 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 ZCCHC23Q6ZST2 131 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 RFX8Q6ZV50 586 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.35□□□□□ -0.59
C9orf3-214ENST00000473778 SIGLEC10Q96LC7 697 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 FAM49BQ9NUQ9 324 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 NMRK1Q9NWW6 199 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 PAK5Q9P286 719 aa11.35□□□□□ -0.59
C9orf3-214ENST00000473778 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.35□□□□□ -0.59
C9orf3-214ENST00000473778 A6NHS1 94 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 KLF11O14901 512 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 PAPSS1O43252 624 aaPredicted RBP11.34□□□□□ -0.59
C9orf3-214ENST00000473778 TBX10O75333 385 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 GSRP00390 522 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 KITP10721 976 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 INSRRP14616 1297 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 AMPD1P23109 780 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 RAB27AP51159 221 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 BCAR1P56945 870 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 OCRLQ01968 901 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 CBLBQ13191 982 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 RCN1Q15293 331 aa11.34□□□□□ -0.59
C9orf3-214ENST00000473778 GOLGA7BQ2TAP0 167 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms