RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 DUSP9Q99956 384 aaKnown RBP13.34□□□□□ -0.27
TRAF4-209ENST00000473421 GPR174Q9BXC1 333 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 CCDC86Q9H6F5 360 aaKnown RBP13.34□□□□□ -0.27
TRAF4-209ENST00000473421 DMAP1Q9NPF5 467 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-209ENST00000473421 WSB2Q9NYS7 404 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-209ENST00000473421 CLEC4EQ9ULY5 219 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 BTBD3Q9Y2F9 522 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 STON1Q9Y6Q2 735 aa13.34□□□□□ -0.27
TRAF4-209ENST00000473421 URB1O60287 2271 aaKnown RBP13.34□□□□□ -0.27
TRAF4-209ENST00000473421 GOLGA4Q13439 2230 aaKnown RBP13.33□□□□□ -0.27
TRAF4-209ENST00000473421 MYH10P35580 1976 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 FAM149AA5PLN7 773 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 HHLA1C9JL84 531 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 KIAA0391O15091 583 aaKnown RBP13.33□□□□□ -0.28
TRAF4-209ENST00000473421 NDUFS2O75306 463 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 STAU1O95793 577 aaKnown RBP13.33□□□□□ -0.28
TRAF4-209ENST00000473421 FAM163BP0C2L3 166 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 CD6P30203 668 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 IL12RB1P42701 662 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 MAP3K7CLP57077 242 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 SLC14A1Q13336 389 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 GEN1Q17RS7 908 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 Q6ZNB5 142 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 CACUL1Q86Y37 369 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 C1orf216Q8TAB5 229 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 SLC2A14Q8TDB8 520 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 SORCS1Q8WY21 1168 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 JAKMIP2Q96AA8 810 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 LRIG1Q96JA1 1093 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 MIR1-1HGQ9H1L0 117 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAF4-209ENST00000473421 FAM49BQ9NUQ9 324 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 KBTBD4Q9NVX7 518 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 MARK1Q9P0L2 795 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 PCDHB9Q9Y5E1 797 aa13.33□□□□□ -0.28
TRAF4-209ENST00000473421 SETXQ7Z333 2677 aaKnown RBP13.33□□□□□ -0.28
TRAF4-209ENST00000473421 CABIN1Q9Y6J0 2220 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 KCNK3O14649 394 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 DGKGP49619 791 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 DLG4P78352 724 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 EHHADHQ08426 723 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 TRPC3Q13507 836 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 SLC39A14Q15043 492 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 SPOPLQ6IQ16 392 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 LAYNQ6UX15 382 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 GLRX5Q86SX6 157 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 BAHD1Q8TBE0 780 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-209ENST00000473421 SETD7Q8WTS6 366 aaKnown RBP13.32□□□□□ -0.28
TRAF4-209ENST00000473421 TWNKQ96RR1 684 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 NACA2Q9H009 215 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 FAM124BQ9H5Z6 455 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-209ENST00000473421 GAREM1Q9H706 876 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 PRDM16Q9HAZ2 1276 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 KIAA1586Q9HCI6 787 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 CSNK1G1Q9HCP0 422 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 CYLDQ9NQC7 956 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 ITM2CQ9NQX7 267 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 USP36Q9P275 1121 aaKnown RBP13.32□□□□□ -0.28
TRAF4-209ENST00000473421 FBXO10Q9UK96 956 aa13.32□□□□□ -0.28
TRAF4-209ENST00000473421 TMEM131Q92545 1883 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 A0A1B0GVT2 93 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 A0A1W2PQH9 124 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 GOLGA8CPA6NN73 597 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 LRRIQ3A6PVS8 624 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-209ENST00000473421 CILPO75339 1184 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 DKK1O94907 266 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 C4BPAP04003 597 aaKnown RBP13.31□□□□□ -0.28
TRAF4-209ENST00000473421 NCAM1P13591 858 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 ACO1P21399 889 aaKnown RBP13.31□□□□□ -0.28
TRAF4-209ENST00000473421 SYT1P21579 422 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 PRKCHP24723 683 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 RDXP35241 583 aaKnown RBP13.31□□□□□ -0.28
TRAF4-209ENST00000473421 TXLNAP40222 546 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 TPMTP51580 245 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 NDST1P52848 882 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 ASIC1P78348 528 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 CUL4AQ13619 759 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 HNRNPDQ14103 355 aaKnown RBP13.31□□□□□ -0.28
TRAF4-209ENST00000473421 HLA-BQ31612 363 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 KCNT1Q5JUK3 1230 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 FAM26FQ5R3K3 315 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 DCAF12L1Q5VU92 463 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 TMEM215Q68D42 235 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 SDE2Q6IQ49 451 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 RABEPKQ7Z6M1 372 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 SCD5Q86SK9 330 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 XXYLT1Q8NBI6 393 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 RBBP8NLQ8NC74 664 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-209ENST00000473421 SMARCD1Q96GM5 515 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 BLZF1Q9H2G9 400 aa13.31□□□□□ -0.28
TRAF4-209ENST00000473421 EIF2B4Q9UI10 523 aaKnown RBP13.31□□□□□ -0.28
TRAF4-209ENST00000473421 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-209ENST00000473421 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-209ENST00000473421 A0A1B0GTW7 788 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 METTL12A8MUP2 240 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 MEI4A8MW99 385 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 EIF3DO15371 548 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAF4-209ENST00000473421 STC2O76061 302 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 PRB1P04280 392 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 ADORA2BP29275 332 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms