RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 DDX47Q9H0S4 455 aaKnown RBP13.14□□□□□ -0.31
PCCB-211ENST00000473073 FAM204AQ9H8W3 233 aa13.14□□□□□ -0.31
PCCB-211ENST00000473073 DDIT4Q9NX09 232 aa13.14□□□□□ -0.31
PCCB-211ENST00000473073 SFMBT1Q9UHJ3 866 aa13.14□□□□□ -0.31
PCCB-211ENST00000473073 TTC7AQ9ULT0 858 aaPredicted RBP13.14□□□□□ -0.31
PCCB-211ENST00000473073 SCML2Q9UQR0 700 aa13.14□□□□□ -0.31
PCCB-211ENST00000473073 YIPF1Q9Y548 306 aa13.14□□□□□ -0.31
PCCB-211ENST00000473073 TRANK1O15050 2925 aa13.14□□□□□ -0.31
PCCB-211ENST00000473073 GRM6O15303 877 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 MSI1O43347 362 aaKnown RBP13.13□□□□□ -0.31
PCCB-211ENST00000473073 TGM5O43548 720 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 YWHAQP27348 245 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 IRS1P35568 1242 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 RPL10AP62906 217 aaKnown RBP13.13□□□□□ -0.31
PCCB-211ENST00000473073 DEUP1Q05D60 604 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 MMRN1Q13201 1228 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 TPGS2Q68CL5 300 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 SPOCD1Q6ZMY3 1216 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 STRADAQ7RTN6 431 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 PYROXD2Q8N2H3 581 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 KCTD6Q8NC69 237 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 DQX1Q8TE96 717 aaKnown RBP13.13□□□□□ -0.31
PCCB-211ENST00000473073 UBXN4Q92575 508 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 SPATA17Q96L03 361 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 KRT12Q99456 494 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 CALN1Q9BXU9 219 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 OSBPL8Q9BZF1 889 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 FBXO44Q9H4M3 255 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 ANLNQ9NQW6 1124 aa13.13□□□□□ -0.31
PCCB-211ENST00000473073 DDX56Q9NY93 547 aaKnown RBP13.13□□□□□ -0.31
PCCB-211ENST00000473073 COL4A4P53420 1690 aaPredicted RBP13.13□□□□□ -0.31
PCCB-211ENST00000473073 MDM4O15151 490 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 KDELR1P24390 212 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 RDXP35241 583 aaKnown RBP13.12□□□□□ -0.31
PCCB-211ENST00000473073 CDKN2BP42772 138 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 TUFMP49411 452 aaKnown RBP13.12□□□□□ -0.31
PCCB-211ENST00000473073 CDH6P55285 790 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 TWF1Q12792 350 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 BNIPLQ7Z465 357 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 RCOR2Q8IZ40 523 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 MICAL1Q8TDZ2 1067 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 RBM41Q96IZ5 413 aaKnown RBP13.12□□□□□ -0.31
PCCB-211ENST00000473073 PLVAPQ9BX97 442 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 RXFP1Q9HBX9 757 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 WDR6Q9NNW5 1121 aaKnown RBP13.12□□□□□ -0.31
PCCB-211ENST00000473073 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCCB-211ENST00000473073 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.12□□□□□ -0.31
PCCB-211ENST00000473073 FNIP2Q9P278 1114 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 H0YGN5 161 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 I6L893 689 aaPredicted RBP13.12□□□□□ -0.31
PCCB-211ENST00000473073 ELF1P32519 619 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 DYNLT1P63172 113 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 CAMK1Q14012 370 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 SIX1Q15475 284 aaPredicted RBP13.12□□□□□ -0.31
PCCB-211ENST00000473073 PPP6R3Q5H9R7 873 aaPredicted RBP13.12□□□□□ -0.31
PCCB-211ENST00000473073 MON1AQ86VX9 555 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 CMASQ8NFW8 434 aaPredicted RBP13.12□□□□□ -0.31
PCCB-211ENST00000473073 ATG4AQ8WYN0 398 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 CASP10Q92851 521 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 HAUS1Q96CS2 278 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 KLHL5Q96PQ7 755 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 LRRC1Q9BTT6 524 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 PBX4Q9BYU1 374 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 TLR9Q9NR96 1032 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 ABCC13Q9NSE7 274 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 IL37Q9NZH6 218 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 AP4E1Q9UPM8 1137 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 R3HDM2Q9Y2K5 976 aaKnown RBP13.12□□□□□ -0.31
PCCB-211ENST00000473073 XIRP2A4UGR9 3374 aa13.12□□□□□ -0.31
PCCB-211ENST00000473073 EYSQ5T1H1 3165 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 hCG_1818297A0A087WSY0 165 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 C2orf71A6NGG8 1288 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 FSCN2O14926 492 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 RTN3O95197 1032 aaPredicted RBP13.11□□□□□ -0.31
PCCB-211ENST00000473073 TBX18O95935 607 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 KLRC2P26717 231 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 GGCXP38435 758 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 ALDH1A3P47895 512 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 SLC7A5Q01650 507 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 PLD1Q13393 1074 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 KRT81Q14533 505 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 TFDP3Q5H9I0 405 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 ERMARDQ5T6L9 678 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 PRELID2Q8N945 189 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 HDAC7Q8WUI4 952 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 C1orf54Q8WWF1 131 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 NAP1L3Q99457 506 aaPredicted RBP13.11□□□□□ -0.31
PCCB-211ENST00000473073 GDF15Q99988 308 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 DHX35Q9H5Z1 703 aaKnown RBP13.11□□□□□ -0.31
PCCB-211ENST00000473073 RWDD3Q9Y3V2 267 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 INSL5Q9Y5Q6 135 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 FAM92AA1XBS5 289 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 C5orf67F2Z3F1 127 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 ENDOD1O94919 500 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 HMGA1P17096 107 aaKnown RBP13.11□□□□□ -0.31
PCCB-211ENST00000473073 ARSEP51690 589 aa13.11□□□□□ -0.31
PCCB-211ENST00000473073 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
PCCB-211ENST00000473073 SNX1Q13596 522 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms