RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 SPEM1Q8N4L4 309 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 WDTC1Q8N5D0 677 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 NAT16Q8N8M0 369 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 CLEC4CQ8WTT0 213 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 STK32AQ8WU08 396 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 RNF139Q8WU17 664 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 IRGQQ8WZA9 623 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 EDEM1Q92611 657 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 EZH1Q92800 747 aaPredicted RBP9.59□□□□□ -0.87
SYN3-211ENST00000472027 LSM14BQ9BX40 385 aaKnown RBP9.59□□□□□ -0.87
SYN3-211ENST00000472027 NAA15Q9BXJ9 866 aaKnown RBP9.59□□□□□ -0.87
SYN3-211ENST00000472027 SLC4A5Q9BY07 1137 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 NAT10Q9H0A0 1025 aaKnown RBP9.59□□□□□ -0.87
SYN3-211ENST00000472027 PRMT8Q9NR22 394 aaPredicted RBP9.59□□□□□ -0.87
SYN3-211ENST00000472027 SPHK2Q9NRA0 654 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 ST7Q9NRC1 585 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 OLA1Q9NTK5 396 aaKnown RBP9.59□□□□□ -0.87
SYN3-211ENST00000472027 MARCH2Q9P0N8 246 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 LIMA1Q9UHB6 759 aaKnown RBP9.59□□□□□ -0.87
SYN3-211ENST00000472027 SFMBT1Q9UHJ3 866 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 CYTH4Q9UIA0 394 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 STRIP2Q9ULQ0 834 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 FHOD1Q9Y613 1164 aa9.59□□□□□ -0.87
SYN3-211ENST00000472027 KIF26AQ9ULI4 1882 aaPredicted RBP9.59□□□□□ -0.87
SYN3-211ENST00000472027 PATJQ8NI35 1801 aa9.59□□□□□ -0.88
SYN3-211ENST00000472027 MYH10P35580 1976 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 PROB1E7EW31 1015 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 RNF40O75150 1001 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 FBXO21O94952 628 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 LTFP02788 710 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 KLKB1P03952 638 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 UCHL3P15374 230 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 ZNF18P17022 549 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 EIF2DP41214 584 aaKnown RBP9.58□□□□□ -0.88
SYN3-211ENST00000472027 ACADSBP45954 432 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 KLK7P49862 253 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 MRE11P49959 708 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 COPB1P53618 953 aaKnown RBP9.58□□□□□ -0.88
SYN3-211ENST00000472027 BPIFB4P59827 614 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 RAPGEF1Q13905 1077 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 PPP2R5DQ14738 602 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 KLHL40Q2TBA0 621 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 ANO4Q32M45 955 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 FKBP15Q5T1M5 1219 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 PKN3Q6P5Z2 889 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 Q6ZNB5 142 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 TPGS1Q6ZTW0 290 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 TMEM110Q86TL2 294 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 SLC47A2Q86VL8 602 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 C12orf40Q86WS4 652 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 FMNL3Q8IVF7 1028 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 FAM71AQ8IYT1 594 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 AOPEPQ8N6M6 819 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 ANKRD20A12PQ8NF67 263 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 PNKPQ96T60 521 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 BPIFA3Q9BQP9 254 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 STK33Q9BYT3 514 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 DCLK3Q9C098 648 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 LHX5Q9H2C1 402 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 HSD3B7Q9H2F3 369 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 PLCB1Q9NQ66 1216 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 C2orf42Q9NWW7 574 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 PCDHGC3Q9UN70 934 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 ZNF510Q9Y2H8 683 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 R4GN57 208 aa9.58□□□□□ -0.88
SYN3-211ENST00000472027 HELZP42694 1942 aaKnown RBP9.57□□□□□ -0.88
SYN3-211ENST00000472027 MIA3Q5JRA6 1907 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 A0A0A0MRY4 1105 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 ANTXRLA6NF34 631 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 SMTNL1A8MU46 457 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 CHURC1-FNTBB4DL54 471 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 E5RJQ4 531 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 K7EQS6 105 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 HOXC11O43248 304 aaPredicted RBP9.57□□□□□ -0.88
SYN3-211ENST00000472027 ATG13O75143 517 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 FYNP06241 537 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 TDGF1P13385 188 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 CORO1AP31146 461 aaKnown RBP9.57□□□□□ -0.88
SYN3-211ENST00000472027 KRT9P35527 623 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 CHKAP35790 457 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 NRLP54845 237 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 TRIP4Q15650 581 aaPredicted RBP9.57□□□□□ -0.88
SYN3-211ENST00000472027 APTXQ7Z2E3 356 aaKnown RBP9.57□□□□□ -0.88
SYN3-211ENST00000472027 DENND1CQ8IV53 801 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 PASD1Q8IV76 773 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 DHX40Q8IX18 779 aaKnown RBP9.57□□□□□ -0.88
SYN3-211ENST00000472027 ETFBKMTQ8IXQ9 262 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 GOLGA1Q92805 767 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 NELL1Q92832 810 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 PLD4Q96BZ4 506 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 FUCA2Q9BTY2 467 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 BBS2Q9BXC9 721 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 GANQ9H2C0 597 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 ZSCAN32Q9NX65 697 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 WDR35Q9P2L0 1181 aa9.57□□□□□ -0.88
SYN3-211ENST00000472027 AGO1Q9UL18 857 aaKnown RBP9.57□□□□□ -0.88
SYN3-211ENST00000472027 HBS1LQ9Y450 684 aaKnown RBP9.57□□□□□ -0.88
SYN3-211ENST00000472027 LGALS16A8MUM7 142 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 NEDD8-MDP1E9PL57 170 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms