RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 C8orf34Q49A92 452 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 CCDC73Q6ZRK6 1079 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 SETD7Q8WTS6 366 aaKnown RBP20.91■□□□□ 0.94
CCDC78-208ENST00000471861 CCDC127Q96BQ5 260 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 SMARCD1Q96GM5 515 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 SMOQ99835 787 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 GPR174Q9BXC1 333 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 SDCBP2Q9H190 292 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 GAREM1Q9H706 876 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 KIAA1586Q9HCI6 787 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 AGPAT3Q9NRZ7 376 aa20.91■□□□□ 0.94
CCDC78-208ENST00000471861 ATP8B3O60423 1300 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 CILPO75339 1184 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 AP1G2O75843 785 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 ZNF883P0CG24 379 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 TXLNAP40222 546 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 EPM2AIP1Q7L775 607 aaPredicted RBP20.9■□□□□ 0.94
CCDC78-208ENST00000471861 METTL3Q86U44 580 aaKnown RBP20.9■□□□□ 0.94
CCDC78-208ENST00000471861 CCDC65Q8IXS2 484 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 BHMTQ93088 406 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 MED10Q9BTT4 135 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 NACA2Q9H009 215 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 TM7SF3Q9NS93 570 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 COMMD8Q9NX08 183 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 PPP4R2Q9NY27 417 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 PLK2Q9NYY3 685 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 WDR35Q9P2L0 1181 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 SLCO1B1Q9Y6L6 691 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 STON1Q9Y6Q2 735 aa20.9■□□□□ 0.94
CCDC78-208ENST00000471861 CCDC130P13994 396 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 DCAF12L1Q5VU92 463 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 FAM173BQ6P4H8 233 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 Q6ZNB5 142 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 DBX2Q6ZNG2 339 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 GPRIN1Q7Z2K8 1008 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 C1orf216Q8TAB5 229 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 PLEKHO2Q8TD55 490 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 MIR1-1HGQ9H1L0 117 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 PRDM16Q9HAZ2 1276 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 CYLDQ9NQC7 956 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 ITM2CQ9NQX7 267 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 FBXO10Q9UK96 956 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 BTBD3Q9Y2F9 522 aa20.89■□□□□ 0.93
CCDC78-208ENST00000471861 HELZ2Q9BYK8 2649 aaKnown RBP20.89■□□□□ 0.93
CCDC78-208ENST00000471861 MDM4O15151 490 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 IL12RB1P42701 662 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 CYP2J2P51589 502 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 ORC1Q13415 861 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 CAMK2BQ13554 666 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 ENPP2Q13822 863 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 HLA-BQ31612 363 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 SCARA5Q6ZMJ2 495 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 CADM4Q8NFZ8 388 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 VRTNQ9H8Y1 702 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 CSNK1G1Q9HCP0 422 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 HMGXB4Q9UGU5 601 aa20.88■□□□□ 0.93
CCDC78-208ENST00000471861 URB1O60287 2271 aaKnown RBP20.87■□□□□ 0.93
CCDC78-208ENST00000471861 CLIC2O15247 247 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 EIF3DO15371 548 aaKnown RBP eCLIP20.87■□□□□ 0.93
CCDC78-208ENST00000471861 BCAT2O15382 392 aaPredicted RBP20.87■□□□□ 0.93
CCDC78-208ENST00000471861 CER1O95813 267 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 ATICP31939 592 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 MATKP42679 507 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 CASP4P49662 377 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 TPMTP51580 245 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 TRPC3Q13507 836 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 STXBP4Q6ZWJ1 553 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 ACOT1Q86TX2 421 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 PDILTQ8N807 584 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 ADAM32Q8TC27 787 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 ZNF507Q8TCN5 953 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 SYAP1Q96A49 352 aaPredicted RBP20.87■□□□□ 0.93
CCDC78-208ENST00000471861 NMUR1Q9HB89 426 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 TLR8Q9NR97 1041 aaKnown RBP20.87■□□□□ 0.93
CCDC78-208ENST00000471861 NUDT5Q9UKK9 219 aa20.87■□□□□ 0.93
CCDC78-208ENST00000471861 VPS37CA5D8V6 355 aaPredicted RBP20.86■□□□□ 0.93
CCDC78-208ENST00000471861 METTL12A8MUP2 240 aa20.86■□□□□ 0.93
CCDC78-208ENST00000471861 CYP26A1O43174 497 aa20.86■□□□□ 0.93
CCDC78-208ENST00000471861 IGLV3-19P01714 112 aa20.86■□□□□ 0.93
CCDC78-208ENST00000471861 ACO1P21399 889 aaKnown RBP20.86■□□□□ 0.93
CCDC78-208ENST00000471861 COPAP53621 1224 aa20.86■□□□□ 0.93
CCDC78-208ENST00000471861 MFAP3P55082 362 aa20.86■□□□□ 0.93
CCDC78-208ENST00000471861 CEBPZQ03701 1054 aaKnown RBP20.86■□□□□ 0.93
CCDC78-208ENST00000471861 CYP4F3Q08477 520 aa20.86■□□□□ 0.93
CCDC78-208ENST00000471861 GEN1Q17RS7 908 aa20.86■□□□□ 0.93
CCDC78-208ENST00000471861 SLC2A14Q8TDB8 520 aa20.86■□□□□ 0.93
CCDC78-208ENST00000471861 THAP10Q9P2Z0 257 aaPredicted RBP20.86■□□□□ 0.93
CCDC78-208ENST00000471861 EIF2B4Q9UI10 523 aaKnown RBP20.86■□□□□ 0.93
CCDC78-208ENST00000471861 LSM7Q9UK45 103 aaKnown RBP20.86■□□□□ 0.93
CCDC78-208ENST00000471861 SLC27A6Q9Y2P4 619 aa20.86■□□□□ 0.93
CCDC78-208ENST00000471861 ASH1LQ9NR48 2969 aaKnown RBP20.86■□□□□ 0.93
CCDC78-208ENST00000471861 A0A087WV48 116 aa20.85■□□□□ 0.93
CCDC78-208ENST00000471861 A0A1B0GVT2 93 aa20.85■□□□□ 0.93
CCDC78-208ENST00000471861 FAM149AA5PLN7 773 aa20.85■□□□□ 0.93
CCDC78-208ENST00000471861 TRABD2BA6NFA1 517 aa20.85■□□□□ 0.93
CCDC78-208ENST00000471861 HHLA1C9JL84 531 aa20.85■□□□□ 0.93
CCDC78-208ENST00000471861 FLRT2O43155 660 aa20.85■□□□□ 0.93
CCDC78-208ENST00000471861 PENKP01210 267 aaPredicted RBP20.85■□□□□ 0.93
CCDC78-208ENST00000471861 ATP5C1P36542 298 aaKnown RBP20.85■□□□□ 0.93
CCDC78-208ENST00000471861 MAP3K7CLP57077 242 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms