RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SPAG17Q6Q759 2223 aa8.52□□□□□ -1.05
USP48-207ENST00000471752 TCRBV21S2A2A0A5A6 115 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 NEDD8-MDP1E9PL57 170 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 PIK3R2O00459 728 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 CDX4O14627 284 aaPredicted RBP8.51□□□□□ -1.05
USP48-207ENST00000471752 MAPK13O15264 365 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 LRP3O75074 770 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 STC2O76061 302 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 CAVIN2O95810 425 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 APODP05090 189 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 ADRB1P08588 477 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 TYRP14679 529 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 PFKLP17858 780 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 GABRG2P18507 467 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 SPINK2P20155 84 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 P2RY2P41231 377 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 DHPSP49366 369 aaPredicted RBP8.51□□□□□ -1.05
USP48-207ENST00000471752 GAD2Q05329 585 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 EFEMP1Q12805 493 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 C10orf120Q5SQS8 335 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 C10orf76Q5T2E6 689 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 PMS2CLQ68D20 193 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 Q6ZNB5 142 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 INTS8Q75QN2 995 aaKnown RBP8.51□□□□□ -1.05
USP48-207ENST00000471752 ZC3H3Q8IXZ2 948 aaKnown RBP8.51□□□□□ -1.05
USP48-207ENST00000471752 UBR7Q8N806 425 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 SORCS1Q8WY21 1168 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 OVCA2Q8WZ82 227 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 TFAP2BQ92481 460 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 PIGKQ92643 395 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 TAF4BQ92750 862 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 DUSP9Q99956 384 aaKnown RBP8.51□□□□□ -1.05
USP48-207ENST00000471752 NIF3L1Q9GZT8 377 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 CYLDQ9NQC7 956 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 CISHQ9NSE2 258 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 NAGPAQ9UK23 515 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 RALYQ9UKM9 306 aaKnown RBP8.51□□□□□ -1.05
USP48-207ENST00000471752 SH3BP1Q9Y3L3 701 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 USP3Q9Y6I4 520 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 MYO16Q9Y6X6 1858 aa8.51□□□□□ -1.05
USP48-207ENST00000471752 ATXN2Q99700 1313 aaKnown RBP8.51□□□□□ -1.05
USP48-207ENST00000471752 LNP1A1A4G5 178 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 PPP1R3GB7ZBB8 358 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 SLC9A3R1O14745 358 aaPredicted RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 HOXC11O43248 304 aaPredicted RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 ADH1CP00326 375 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 ITPKAP23677 461 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 ATP5C1P36542 298 aaKnown RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 TNFRSF4P43489 277 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 MRPS21P82921 87 aaKnown RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 APBA1Q02410 837 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 PDE4CQ08493 712 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 USP39Q53GS9 565 aaKnown RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 LCE2DQ5TA82 110 aaPredicted RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 TMEM215Q68D42 235 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 KRT39Q6A163 491 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 RALGAPA1Q6GYQ0 2036 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 PIGZQ86VD9 579 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 ZNF513Q8N8E2 541 aaPredicted RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 PDZD8Q8NEN9 1154 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 SPATA20Q8TB22 786 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 EDEM1Q92611 657 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 ACDQ96AP0 544 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 MYEOVQ96EZ4 313 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 TMEM176AQ96HP8 235 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 LOXL4Q96JB6 756 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 CNOT6LQ96LI5 555 aaKnown RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 BBS2Q9BXC9 721 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 SCAND2PQ9GZW5 306 aaPredicted RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 CYP3A43Q9HB55 503 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 TLR8Q9NR97 1041 aaKnown RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 DNAJC17Q9NVM6 304 aaKnown RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 COMMD8Q9NX08 183 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 RAB20Q9NX57 234 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 CACNA2D2Q9NY47 1150 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 TBC1D14Q9P2M4 693 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 DEC1Q9P2X7 70 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 AGO1Q9UL18 857 aaKnown RBP8.5□□□□□ -1.05
USP48-207ENST00000471752 SLCO1B1Q9Y6L6 691 aa8.5□□□□□ -1.05
USP48-207ENST00000471752 CELSR3Q9NYQ7 3312 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 GOLGA6L7A0A1B0GV03 622 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 BIN1O00499 593 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 TSPAN3O60637 253 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 KCNK5O95279 499 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 MYL1P05976 194 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 KRT13P13646 458 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 P4HA1P13674 534 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 NDUFV2P19404 249 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 MAOBP27338 520 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 RGS7P49802 495 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 MXI1P50539 228 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 TUBP50607 506 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 PDE6CP51160 858 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 SGSHP51688 502 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 FAM193AP78312 1265 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 GEN1Q17RS7 908 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 GOLGA7BQ2TAP0 167 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 EDRF1Q3B7T1 1238 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 RAB41Q5JT25 222 aa8.49□□□□□ -1.05
USP48-207ENST00000471752 TCERG1LQ5VWI1 586 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms