RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ARID3BQ8IVW6 561 aaPredicted RBP13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FEZF2Q8TBJ5 459 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 UBXN6Q9BZV1 441 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 DNAJC11Q9NVH1 559 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ALKBH4Q9NXW9 302 aa13.62□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 A0A0B4J269 797 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PDXKO00764 312 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CCNT2O60583 730 aaKnown RBP13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SKIV2L2P42285 1042 aaKnown RBP13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TUBB3Q13509 450 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CDK20Q8IZL9 346 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PPP1R2P1Q96PQ5 205 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PRKAB1Q9Y478 270 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CNTNAP2Q9UHC6 1331 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 EXTL3O43909 919 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ATP2C1P98194 919 aaPredicted RBP13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 COX10Q12887 443 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TAF5Q15542 800 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CCDC54Q8NEL0 328 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PLEKHF1Q96S99 279 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ELOVL6Q9H5J4 265 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 MANSC1Q9H8J5 431 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 KCNH7Q9NS40 1196 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PZPP20742 1482 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 OR6A2O95222 327 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CYP24A1Q07973 514 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 NR6A1Q15406 480 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SHQ1Q6PI26 577 aaKnown RBP13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TPGS1Q6ZTW0 290 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CYP4Z1Q86W10 505 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FAM111AQ96PZ2 611 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 BBS4Q96RK4 519 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 OSMRQ99650 979 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 OMDQ99983 421 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 VTA1Q9NP79 307 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GPRC5DQ9NZD1 345 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SMG5Q9UPR3 1016 aaKnown RBP13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SAMD9Q5K651 1589 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CCDC85CA6NKD9 419 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 H3BN98 237 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 IGKV5-2P06315 115 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SLC2A3P11169 496 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ILKAPQ9H0C8 392 aaPredicted RBP13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TFR2Q9UP52 801 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PCDHB2Q9Y5E7 798 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SLC25A27O95847 323 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 HSD3B1P14060 373 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PPP2R1BP30154 601 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TGM3Q08188 693 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 VAC14Q08AM6 782 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 BIKQ13323 160 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 XRCC4Q13426 336 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SLC18A3Q16572 532 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FAM131BQ86XD5 332 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CAMK1DQ8IU85 385 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CCDC185Q8N715 623 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 E2F7Q96AV8 911 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 MAPKBP1O60336 1514 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ZFYVE16Q7Z3T8 1539 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TBC1D3BA6NDS4 549 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CFAP73A6NFT4 308 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GMFGO60234 142 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 EPN2O95208 641 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 BTG3Q14201 252 aaPredicted RBP13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 DNAL1Q4LDG9 190 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 FAM45AQ8TCE6 357 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SPPL2AQ8TCT8 520 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 REXO5Q96IC2 774 aaKnown RBP13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 DAGLAQ9Y4D2 1042 aa13.61□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TMEM120BA0PK00 339 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ECDO95905 644 aaPredicted RBP13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CNPP09543 421 aaKnown RBP13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CASP4P49662 377 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ZNF618Q5T7W0 954 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 CASP10Q92851 521 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SENP6Q9GZR1 1112 aaPredicted RBP13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 LTFP02788 710 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SNAP47Q5SQN1 464 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 WLSQ5T9L3 541 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SHC4Q6S5L8 630 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 POTEAQ6S8J7 498 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SLFN11Q7Z7L1 901 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TMEM8AQ9HCN3 771 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 ZMYM5Q9UJ78 669 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 RPS6KA6Q9UK32 745 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 NLRP1Q9C000 1473 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 GTF2A2P52657 109 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PRKAG1P54619 331 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 C12orf60Q5U649 245 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 PARGQ86W56 976 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 COLGALT2Q8IYK4 626 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 SNRNP27Q8WVK2 155 aaKnown RBP13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TAAR1Q96RJ0 339 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 POP1Q99575 1024 aaKnown RBP13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 TRIM9Q9C026 710 aa13.6□□□□□ -0.23
NPHP3-ACAD11-201ENST00000471702 VPS9D1Q9Y2B5 631 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms