RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 FAM133BQ5BKY9 247 aaKnown RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 XKR4Q5GH76 650 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 KLHL35Q6PF15 583 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 UPF1Q92900 1129 aaKnown RBP eCLIP8.85□□□□□ -0.99
CD47-204ENST00000471694 CELF4Q9BZC1 486 aaKnown RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 GOLPH3Q9H4A6 298 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 RNF103-CHMP3A0A140T963 221 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 LGALS16A8MUM7 142 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 TUBP50607 506 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 RTP1P59025 263 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 PRKCZQ05513 592 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 CELF3Q5SZQ8 465 aaKnown RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 ATAD3BQ5T9A4 648 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 COPS5Q92905 334 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 GEMIN8Q9NWZ8 242 aaKnown RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 STK39Q9UEW8 545 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 ZC3H7BQ9UGR2 993 aaKnown RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 KIAA1257Q9ULG3 409 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 HEMK1Q9Y5R4 338 aaPredicted RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 BTBD19C9JJ37 291 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 NFATC1O95644 943 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 MMP3P08254 477 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 ZBTB48P10074 688 aaPredicted RBP8.85□□□□□ -0.99
CD47-204ENST00000471694 ITGAXP20702 1163 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 RRM1P23921 792 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 CHKAP35790 457 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 ADIGQ0VDE8 80 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 ATP13A4Q4VNC1 1196 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 PACS1Q6VY07 963 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 ALLCQ8N6M5 410 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 CYTH2Q99418 400 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 EHD4Q9H223 541 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 LMBRD1Q9NUN5 540 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 RNF19AQ9NV58 838 aa8.85□□□□□ -0.99
CD47-204ENST00000471694 GOLGA8TH3BQL2 631 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 MAPK1P28482 360 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 FOXM1Q08050 763 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 SHROOM1Q2M3G4 852 aaPredicted RBP8.84□□□□□ -0.99
CD47-204ENST00000471694 GRAMD1BQ3KR37 738 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 ARMC12Q5T9G4 340 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 KLHL29Q96CT2 875 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 OSBPL9Q96SU4 736 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 AURKCQ9UQB9 309 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 TRDMT1O14717 391 aaKnown RBP8.84□□□□□ -0.99
CD47-204ENST00000471694 UMPSP11172 480 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 PPP4CP60510 307 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 CCDC137Q6PK04 289 aaKnown RBP8.84□□□□□ -0.99
CD47-204ENST00000471694 BRSK2Q8IWQ3 736 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 KLHL23Q8NBE8 558 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 OSBPL3Q9H4L5 887 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 PAK5Q9P286 719 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 AK5Q9Y6K8 562 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 UQCRBP14927 111 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 IL2P60568 153 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 EPC2Q52LR7 807 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 ZNF544Q6NX49 715 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 ARMCX6Q7L4S7 300 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 TEX9Q8N6V9 391 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 OR14C36Q8NHC7 312 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 METTL21AQ8WXB1 218 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 TMEM176AQ96HP8 235 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 JSRP1Q96MG2 331 aaPredicted RBP8.84□□□□□ -0.99
CD47-204ENST00000471694 GID8Q9NWU2 228 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 IL1RAPL1Q9NZN1 696 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 WARS2Q9UGM6 360 aaKnown RBP8.84□□□□□ -0.99
CD47-204ENST00000471694 ZNF541Q9H0D2 1346 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 PER2O15055 1255 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 RNASEH2AO75792 299 aaKnown RBP8.84□□□□□ -0.99
CD47-204ENST00000471694 GLP2RO95838 553 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 ASGR1P07306 291 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 PLA2G4AP47712 749 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 NECTIN1Q15223 517 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 GLT6D1Q7Z4J2 308 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 ZNF669Q96BR6 464 aaPredicted RBP8.84□□□□□ -0.99
CD47-204ENST00000471694 CENPTQ96BT3 561 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 BTBD9Q96Q07 612 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.84□□□□□ -0.99
CD47-204ENST00000471694 STOML1Q9UBI4 398 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 UBA2Q9UBT2 640 aaPredicted RBP8.84□□□□□ -0.99
CD47-204ENST00000471694 ANGPTL2Q9UKU9 493 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 MADDQ8WXG6 1647 aa8.84□□□□□ -0.99
CD47-204ENST00000471694 SPRP35270 261 aaPredicted RBP8.84□□□□□ -1
CD47-204ENST00000471694 GNA13Q14344 377 aa8.84□□□□□ -1
CD47-204ENST00000471694 SPRYD7Q5W111 196 aa8.84□□□□□ -1
CD47-204ENST00000471694 SARM1Q6SZW1 724 aa8.84□□□□□ -1
CD47-204ENST00000471694 RTFDC1Q9BY42 306 aaPredicted RBP8.84□□□□□ -1
CD47-204ENST00000471694 DUS2Q9NX74 493 aaKnown RBP8.84□□□□□ -1
CD47-204ENST00000471694 SCOCQ9UIL1 159 aa8.84□□□□□ -1
CD47-204ENST00000471694 ST3GAL5Q9UNP4 418 aa8.84□□□□□ -1
CD47-204ENST00000471694 TNS2Q63HR2 1409 aa8.84□□□□□ -1
CD47-204ENST00000471694 NCOA3Q9Y6Q9 1424 aa8.84□□□□□ -1
CD47-204ENST00000471694 CCDC188H7C350 402 aa8.83□□□□□ -1
CD47-204ENST00000471694 KELP23276 732 aa8.83□□□□□ -1
CD47-204ENST00000471694 PAX3P23760 479 aa8.83□□□□□ -1
CD47-204ENST00000471694 UBE3AQ05086 875 aa8.83□□□□□ -1
CD47-204ENST00000471694 SPIDRQ14159 915 aa8.83□□□□□ -1
CD47-204ENST00000471694 GALNTL6Q49A17 601 aa8.83□□□□□ -1
CD47-204ENST00000471694 DACT2Q5SW24 774 aa8.83□□□□□ -1
CD47-204ENST00000471694 WDR49Q8IV35 697 aa8.83□□□□□ -1
CD47-204ENST00000471694 MTMR9Q96QG7 549 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms