RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 GPC5P78333 572 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 HTRA4P83105 476 aaPredicted RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 CFHR3Q02985 330 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 CFHR1Q03591 330 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 SLC14A1Q13336 389 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 LAMB3Q13751 1172 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 CLCA4Q14CN2 919 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 RBMS2Q15434 407 aaKnown RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 TMEM63BQ5T3F8 832 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 TMTC4Q5T4D3 741 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 C10orf25Q5T742 122 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 MANEALQ5VSG8 457 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 AWAT2Q6E213 333 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 CYB5RLQ6IPT4 315 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 MZT2AQ6P582 158 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 VSTM1Q6UX27 236 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 CLEC9AQ6UXN8 241 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 RANBP10Q6VN20 620 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 KRT73Q86Y46 540 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 P3H2Q8IVL5 708 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 WDR75Q8IWA0 830 aaKnown RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 ANKRD13AQ8IZ07 590 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 FSTL5Q8N475 847 aaPredicted RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 PNPLA1Q8N8W4 532 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 NGDNQ8NEJ9 315 aaKnown RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 C16orf52Q8NHV5 167 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 MBD3L2Q8NHZ7 208 aaPredicted RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 TTC8Q8TAM2 541 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 IGFBPL1Q8WX77 278 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 TIFAQ96CG3 184 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 COQ8BQ96D53 544 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 EDC3Q96F86 508 aaKnown RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 HMCESQ96FZ2 354 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 KAZALD1Q96I82 304 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 HIC2Q96JB3 615 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 VPS50Q96JG6 964 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 ZCWPW1Q9H0M4 648 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 SLC25A32Q9H2D1 315 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 USP29Q9HBJ7 922 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 AS3MTQ9HBK9 375 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 PNPLA8Q9NP80 782 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 HEYLQ9NQ87 328 aaPredicted RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 TBC1D23Q9NUY8 699 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 GAR1Q9NY12 217 aaKnown RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 MTMR4Q9NYA4 1195 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 MGAT4CQ9UBM8 478 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 DKK4Q9UBT3 224 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 NKX1-2Q9UD57 310 aaPredicted RBP1.73□□□□□ -2.13
UBXN4-207ENST00000471246 CORO2BQ9UQ03 480 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 HPSEQ9Y251 543 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 SNX13Q9Y5W8 968 aa1.73□□□□□ -2.13
UBXN4-207ENST00000471246 COL15A1P39059 1388 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 A0A087WZ62 844 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 LY6G6EA0A0G2JKS1 128 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 CLIC1O00299 241 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 FYB1O15117 783 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 WDR47O94967 919 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 NTN1O95631 604 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 TMEM225BP0DP42 221 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 PRF1P14222 555 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 RPL17P18621 184 aaKnown RBP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 BTF3P20290 206 aaKnown RBP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 MST1P26927 711 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 TACR3P29371 465 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 GALNSP34059 522 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 NR4A2P43354 598 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 RAE1P78406 368 aaKnown RBP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 ID2Q02363 134 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 ZNF91Q05481 1191 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 SRSF1Q07955 248 aaKnown RBP eCLIP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 CCDC15Q0P6D6 951 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 GPS1Q13098 491 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 MTAPQ13126 283 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 DAG1Q14118 895 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 KPNB1Q14974 876 aaKnown RBP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 TRIM71Q2Q1W2 868 aaKnown RBP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 ZNF260Q3ZCT1 412 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 RRAGBQ5VZM2 374 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 GRHL2Q6ISB3 625 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 ANO7Q6IWH7 933 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 ZNF793Q6ZN11 406 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 MRPL10Q7Z7H8 261 aaKnown RBP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 C14orf80Q86SX3 495 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 PIP4P1Q86T03 277 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 LIX1LQ8IVB5 337 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 KRT78Q8N1N4 520 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 C12orf76Q8N812 135 aaPredicted RBP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 IQCDQ96DY2 449 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 ZDHHC12Q96GR4 267 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 SIGLEC11Q96RL6 698 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 STRBPQ96SI9 672 aaKnown RBP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 TMEM79Q9BSE2 394 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 WACQ9BTA9 647 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 UNKQ9C0B0 810 aaKnown RBP1.72□□□□□ -2.13
UBXN4-207ENST00000471246 VPS45Q9NRW7 570 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 TMEM184CQ9NVA4 438 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 PI4KBQ9UBF8 816 aa1.72□□□□□ -2.13
UBXN4-207ENST00000471246 FZD4Q9ULV1 537 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms