RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 DNASE1L3Q13609 305 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 CLCA4Q14CN2 919 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 CERKLQ49MI3 558 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 AASDHQ4L235 1098 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 TMEM65Q6PI78 240 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 RANBP10Q6VN20 620 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 MBD3L2Q8NHZ7 208 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 ZNF668Q96K58 619 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 WDR24Q96S15 920 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 GATA5Q9BWX5 397 aaPredicted RBP5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 NAA15Q9BXJ9 866 aaKnown RBP5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 SNX15Q9NRS6 342 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 ELOVL5Q9NYP7 299 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 CHPF2Q9P2E5 772 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 STEAP1Q9UHE8 339 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 SNX13Q9Y5W8 968 aa5.9□□□□□ -1.46
PRPF40A-206ENST00000471167 ZNF521Q96K83 1311 aa5.9□□□□□ -1.47
PRPF40A-206ENST00000471167 INMTO95050 263 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 ADRA1DP25100 572 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 PBX1P40424 430 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 NR4A2P43354 598 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 MFSD13AQ14CX5 517 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 RABEP1Q15276 862 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 HSP90AB4PQ58FF6 505 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 ABLIM2Q6H8Q1 611 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 CRTC1Q6UUV9 634 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 SDR16C5Q8N3Y7 309 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 SARGQ9BW04 601 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 METTL14Q9HCE5 456 aaKnown RBP5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 AGO4Q9HCK5 861 aaKnown RBP5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 FAM50BQ9Y247 325 aa5.89□□□□□ -1.47
PRPF40A-206ENST00000471167 A0A1W2PPC4 97 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 POM121BA6NF01 834 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 CLCA1A8K7I4 914 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 RRHO14718 337 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 AREL1O15033 823 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 FGFR2P21802 821 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 GALNSP34059 522 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 YPEL5P62699 121 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 SETQ01105 290 aaPredicted RBP5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 KCNB1Q14721 858 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 TRIP6Q15654 476 aaKnown RBP5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 CCDC181Q5TID7 509 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 RAP1GAP2Q684P5 730 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 PPP4R4Q6NUP7 873 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 OSR1Q8TAX0 266 aaPredicted RBP5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 DENND1AQ8TEH3 1009 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 ZBTB9Q96C00 473 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 SIGLEC11Q96RL6 698 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 SLC25A32Q9H2D1 315 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 TUBA8Q9NY65 449 aaPredicted RBP5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 MYO1AQ9UBC5 1043 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 AFG3L2Q9Y4W6 797 aa5.88□□□□□ -1.47
PRPF40A-206ENST00000471167 WDR47O94967 919 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 CD19P15391 556 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 PHKG2P15735 406 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 GABRB3P28472 473 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 ZNF268Q14587 947 aaPredicted RBP5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 TFAP2DQ7Z6R9 452 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 NRACQ8N912 160 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 TTC17Q96AE7 1141 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 IQCDQ96DY2 449 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 LRRC46Q96FV0 321 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 TBCBQ99426 244 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 TM2D2Q9BX73 214 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 TMEM184CQ9NVA4 438 aa5.87□□□□□ -1.47
PRPF40A-206ENST00000471167 TMEM225BP0DP42 221 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 YY1P25490 414 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 MST1P26927 711 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 RAE1P78406 368 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 GAB1Q13480 694 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 KCNJ12Q14500 433 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 ST3GAL2Q16842 350 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 TRIM71Q2Q1W2 868 aaKnown RBP5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 COBLL1Q53SF7 1204 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 C10orf25Q5T742 122 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 FAM90A2PQ658T7 463 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 MZT2AQ6P582 158 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 ZNF366Q8N895 744 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 C16orf52Q8NHV5 167 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 MORC4Q8TE76 937 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 IPCEF1Q8WWN9 437 aaPredicted RBP5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 C8orf48Q96LL4 319 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 FCRL4Q96PJ5 515 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 FAM118BQ9BPY3 351 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 TMEM79Q9BSE2 394 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 USP29Q9HBJ7 922 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 PNPLA8Q9NP80 782 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 HEYLQ9NQ87 328 aaPredicted RBP5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 MTMR4Q9NYA4 1195 aa5.86□□□□□ -1.47
PRPF40A-206ENST00000471167 LY6G6EA0A0G2JKS1 128 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 M0QZQ0 153 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 DSCR3O14972 297 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 DHHO43323 396 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 THAP12O43422 761 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 NCK2O43639 380 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 SNX2O60749 519 aa5.85□□□□□ -1.47
PRPF40A-206ENST00000471167 CENPBP07199 599 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms