RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 UBASH3AP57075 661 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 MCCD1P59942 119 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 CYP24A1Q07973 514 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 BYSLQ13895 437 aaKnown RBP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 MAP7D1Q3KQU3 841 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 SLC23A3Q6PIS1 610 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 APTXQ7Z2E3 356 aaKnown RBP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 SFTPA1Q8IWL2 248 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 ETFBKMTQ8IXQ9 262 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 TMC2Q8TDI7 906 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 KCNV2Q8TDN2 545 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 RLN3Q8WXF3 142 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 ZFRQ96KR1 1074 aaKnown RBP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 CGRRF1Q99675 332 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 SCNM1Q9BWG6 230 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 NUSAP1Q9BXS6 441 aaKnown RBP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 TRIM5Q9C035 493 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 ZNF518BQ9C0D4 1074 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 SNX25Q9H3E2 840 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 ARHGEF4Q9NR80 690 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 TMEM74BQ9NUR3 256 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 SMPD4Q9NXE4 827 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 TAB2Q9NYJ8 693 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 CFAP97Q9P2B7 532 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 MBD1Q9UIS9 605 aaPredicted RBP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.59□□□□□ -0.87
SF3A1-206ENST00000471037 THADAQ6YHU6 1953 aa9.59□□□□□ -0.87
SF3A1-206ENST00000471037 TCRBV21S2A2A0A5A6 115 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 FAM92AA1XBS5 289 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 SCAMP3O14828 347 aaKnown RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 HOXC11O43248 304 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 AP5Z1O43299 807 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 STX10O60499 249 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 RTN3O95197 1032 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 TOP3BO95985 862 aaKnown RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 MBL2P11226 248 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 ENGP17813 658 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 SPINK2P20155 84 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 YWHAQP27348 245 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 TUBP50607 506 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 VAMP7P51809 220 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 TNNC1P63316 161 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 GAD2Q05329 585 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 KDSRQ06136 332 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 PSMD6Q15008 389 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 UAP1L1Q3KQV9 507 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 WDR72Q3MJ13 1102 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 PREPLQ4J6C6 727 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 VWA3BQ502W6 1294 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 DCAF17Q5H9S7 520 aaPredicted RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 MIIPQ5JXC2 388 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 LY6G5CQ5SRR4 150 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 FKBP15Q5T1M5 1219 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 EMC10Q5UCC4 262 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 SNX30Q5VWJ9 437 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 LYSMD4Q5XG99 296 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 TRMT11Q7Z4G4 463 aaKnown RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 PIP4P1Q86T03 277 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 TTC30AQ86WT1 665 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 NUP93Q8N1F7 819 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 FRMD1Q8N878 549 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 RDH13Q8NBN7 331 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 B3GALNT2Q8NCR0 500 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 DEFB124Q8NES8 71 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 OR6B3Q8NGW1 331 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 HMGB4Q8WW32 186 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 MRFAP1L1Q96HT8 127 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 XPO4Q9C0E2 1151 aaKnown RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 XYLT2Q9H1B5 865 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 VPS16Q9H269 839 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 NDST4Q9H3R1 872 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 DPEP3Q9H4B8 488 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 SLC32A1Q9H598 525 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 RTN4Q9NQC3 1192 aaKnown RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 IL37Q9NZH6 218 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 IFNKQ9P0W0 207 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 BCCIPQ9P287 314 aaKnown RBP eCLIP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 PILRBQ9UKJ0 227 aa9.58□□□□□ -0.88
SF3A1-206ENST00000471037 RALYQ9UKM9 306 aaKnown RBP9.58□□□□□ -0.88
SF3A1-206ENST00000471037 IGF2RP11717 2491 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 A8MXQ7 604 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 MAP3K13O43283 966 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 COCHO43405 550 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 TULP3O75386 442 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 ADCY5O95622 1261 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 ABL1P00519 1130 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 AFPP02771 609 aaKnown RBP9.57□□□□□ -0.88
SF3A1-206ENST00000471037 ZDHHC11BP0C7U3 371 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 DLATP10515 647 aaKnown RBP9.57□□□□□ -0.88
SF3A1-206ENST00000471037 TNNI1P19237 187 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 CDC25BP30305 580 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 ATICP31939 592 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 GTF2H1P32780 548 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 ZNF75DP51815 510 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 CLDN10P78369 228 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 SEMA3BQ13214 749 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 NR1I3Q14994 352 aa9.57□□□□□ -0.88
SF3A1-206ENST00000471037 HECTD3Q5T447 861 aa9.57□□□□□ -0.88
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