RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, human

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VARS-222	ENST00000470953	WSB2	Q9NYS7	404 aa	Predicted RBP	6.27	□□□□□ -1.41
VARS-222	ENST00000470953	GCNT4	Q9P109	453 aa		6.27	□□□□□ -1.41
VARS-222	ENST00000470953	CCDC39	Q9UFE4	941 aa		6.27	□□□□□ -1.41
VARS-222	ENST00000470953	MAGED2	Q9UNF1	606 aa	Predicted RBP	6.27	□□□□□ -1.41
VARS-222	ENST00000470953	RAD54B	Q9Y620	910 aa		6.27	□□□□□ -1.41
VARS-222	ENST00000470953	JMJD1C	Q15652	2540 aa		6.27	□□□□□ -1.41
VARS-222	ENST00000470953	COL6A5	A8TX70	2615 aa		6.27	□□□□□ -1.41
VARS-222	ENST00000470953	MYMK	A6NI61	221 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953		K7ENM7	598 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953		K7ERI5	159 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	HNRNPR	O43390	633 aa	Known RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	SLC26A4	O43511	780 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	TRAK2	O60296	914 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	USP12	O75317	370 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	GJB6	O95452	261 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	NFATC1	O95644	943 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	APOD	P05090	189 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	PLA2G4B	P0C869	781 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	PLCG1	P19174	1290 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	SYT1	P21579	422 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	CD6	P30203	668 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	LONP1	P36776	959 aa	Known RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	GRM5	P41594	1212 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	GRIA2	P42262	883 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	TNFRSF4	P43489	277 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	TUFM	P49411	452 aa	Known RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	AARS	P49588	968 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	MYBPC2	Q14324	1141 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	DHCR24	Q15392	516 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	SEZ6	Q53EL9	994 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	PRAMEF14	Q5SWL7	426 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	ATF7IP2	Q5U623	682 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	EGFLAM	Q63HQ2	1017 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	RHBDF2	Q6PJF5	856 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	FILIP1	Q7Z7B0	1213 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	FAM114A1	Q8IWE2	563 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	SLC34A3	Q8N130	599 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	C4orf32	Q8N8J7	132 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	NAT16	Q8N8M0	369 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	IPO4	Q8TEX9	1081 aa	Known RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	MRPS31	Q92665	395 aa	Known RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	LURAP1	Q96LR2	239 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	ZNF396	Q96N95	335 aa	Predicted RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	CCDC94	Q9BW85	323 aa	Predicted RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	MRPL4	Q9BYD3	311 aa	Known RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	CDT1	Q9H211	546 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	TMEM245	Q9H330	911 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	CASS4	Q9NQ75	786 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	ARHGEF4	Q9NR80	690 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	TOPORS	Q9NS56	1045 aa	Predicted RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	TMLHE	Q9NVH6	421 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	KCND2	Q9NZV8	630 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	CNTN3	Q9P232	1028 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	LARS	Q9P2J5	1176 aa	Known RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	HSFX1	Q9UBD0	423 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	KCNG1	Q9UIX4	513 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	ZMYM5	Q9UJ78	669 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	6.26	□□□□□ -1.41
VARS-222	ENST00000470953	TACC2	O95359	2948 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	ANAPC1	Q9H1A4	1944 aa		6.26	□□□□□ -1.41
VARS-222	ENST00000470953	CIT	O14578	2027 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953		A0A1W2PNU3	283 aa	Predicted RBP	6.25	□□□□□ -1.41
VARS-222	ENST00000470953	E2F8	A0AVK6	867 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	TBC1D3B	A6NDS4	549 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	METTL12	A8MUP2	240 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	WASH3P	C4AMC7	463 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	LEFTY2	O00292	366 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	ABLIM1	O14639	778 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	SLC16A4	O15374	487 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	VPS4B	O75351	444 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	CKM	P06732	381 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	USP17L7	P0C7H9	530 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	HAPLN1	P10915	354 aa	Predicted RBP	6.25	□□□□□ -1.41
VARS-222	ENST00000470953	PLS3	P13797	630 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	GUCY2C	P25092	1073 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	STAT6	P42226	847 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	NPTX2	P47972	431 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	LIG4	P49917	911 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	REST	Q13127	1097 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	KCNAB2	Q13303	367 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	IL17A	Q16552	155 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	ECM1	Q16610	540 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	DDR2	Q16832	855 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	SMTNL2	Q2TAL5	461 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	SLC10A6	Q3KNW5	377 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	INAVA	Q3KP66	663 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	6.25	□□□□□ -1.41
VARS-222	ENST00000470953	TMEM119	Q4V9L6	283 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	RINT1	Q6NUQ1	792 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	KIAA1324	Q6UXG2	1013 aa	Known RBP	6.25	□□□□□ -1.41
VARS-222	ENST00000470953	FOXD4L3	Q6VB84	417 aa	Predicted RBP	6.25	□□□□□ -1.41
VARS-222	ENST00000470953	USP37	Q86T82	979 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	KCTD17	Q8N5Z5	321 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	MYCT1	Q8N699	235 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	KRI1	Q8N9T8	703 aa	Known RBP	6.25	□□□□□ -1.41
VARS-222	ENST00000470953	HTR3C	Q8WXA8	447 aa		6.25	□□□□□ -1.41
VARS-222	ENST00000470953	LARP4B	Q92615	738 aa	Known RBP	6.25	□□□□□ -1.41
VARS-222	ENST00000470953	SNX21	Q969T3	373 aa		6.25	□□□□□ -1.41

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