RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 RXFP1Q9HBX9 757 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 TXNRD2Q9NNW7 524 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.33□□□□□ -1.08
SMC4-212ENST00000470240 PLXNA1Q9UIW2 1896 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 STARD13Q9Y3M8 1113 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 USH1CQ9Y6N9 552 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 MCM3APO60318 1980 aa8.33□□□□□ -1.08
SMC4-212ENST00000470240 CITO14578 2027 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 EVPLQ92817 2033 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 RBM47A0AV96 593 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 C3orf70A6NLC5 250 aaPredicted RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 ZNF487B1APH4 448 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 H3BRB1 525 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 TSPAN1O60635 241 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 PEX10O60683 326 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 HNRNPCL1O60812 293 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 RASSF9O75901 435 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 STK10O94804 968 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 OAS1P00973 400 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 MT-ND3P03897 115 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 TCF4P15884 667 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 ADORA2AP29274 412 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 EPHX2P34913 555 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 RPL22P35268 128 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 SCNN1AP37088 669 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 PNPLA4P41247 253 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 SKIV2L2P42285 1042 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 GPD2P43304 727 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 GTF2A2P52657 109 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 CDH8P55286 799 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 SARNPP82979 210 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 NOMO1Q15155 1222 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 GRIK4Q16099 956 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 PDK4Q16654 411 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 SLC10A6Q3KNW5 377 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 BBS9Q3SYG4 887 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 FAM133BQ5BKY9 247 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 ZC3H12AQ5D1E8 599 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 EFHC2Q5JST6 749 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 SCYL2Q6P3W7 929 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 SLC27A1Q6PCB7 646 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 RGS9BPQ6ZS82 235 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 CAPN12Q6ZSI9 719 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 BZW1Q7L1Q6 419 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 CATSPER4Q7RTX7 472 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 CDR2LQ86X02 465 aaPredicted RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 ANKMY2Q8IV38 441 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 EMC1Q8N766 993 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 MAGEC3Q8TD91 643 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 STK32AQ8WU08 396 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 RXFP2Q8WXD0 754 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 CPT1BQ92523 772 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 USP6NLQ92738 828 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 KAT2BQ92831 832 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 ACSF2Q96CM8 615 aaPredicted RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 FAF2Q96CS3 445 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 CPB2Q96IY4 423 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 CNTNAP3BQ96NU0 1288 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 COL25A1Q9BXS0 654 aaPredicted RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 CNTNAP3Q9BZ76 1288 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 SNX25Q9H3E2 840 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 RNPEPQ9H4A4 650 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 TUT1Q9H6E5 874 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 ACSS3Q9H6R3 686 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 MINDY3Q9H8M7 445 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 LRRC4CQ9HCJ2 640 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 NGRNQ9NPE2 291 aaKnown RBP8.32□□□□□ -1.08
SMC4-212ENST00000470240 TMEM51Q9NW97 253 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 TSPAN16Q9UKR8 245 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 KAT6AQ92794 2004 aa8.32□□□□□ -1.08
SMC4-212ENST00000470240 IQCA1LA6NCM1 817 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 C2CD4BA6NLJ0 364 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 E7ESA3 106 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 GOLGA8MH3BSY2 632 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 MDM4O15151 490 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 KRT37O76014 449 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 NPTXRO95502 500 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 VTNP04004 478 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 INHAP05111 366 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 GJB1P08034 283 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 ZNF286BP0CG31 522 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 ALADP13716 330 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 ETS1P14921 441 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 BCAT1P54687 386 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 BCAR1P56945 870 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 YWHAGP61981 247 aaKnown RBP eCLIP8.31□□□□□ -1.081e-117■■■■■ 400.8
SMC4-212ENST00000470240 ATP11AP98196 1134 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 SLC6A3Q01959 620 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 DPYSL3Q14195 570 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 ZNF792Q3KQV3 632 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 SV2CQ496J9 727 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 KCNT1Q5JUK3 1230 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 UBAP2Q5T6F2 1119 aaKnown RBP8.31□□□□□ -1.08
SMC4-212ENST00000470240 ARHGAP17Q68EM7 881 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 IQSEC1Q6DN90 963 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 TXNRD3NBQ6F5E7 133 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 C3orf62Q6ZUJ4 267 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 FAM183BPQ6ZVS7 135 aa8.31□□□□□ -1.08
SMC4-212ENST00000470240 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms